Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 RPL6P29-201ENST00000414863 865 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AL590806.1-201ENST00000415818 853 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 COX6B1P7-201ENST00000430845 235 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AL356276.2-201ENST00000435919 558 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 RN7SL41P-201ENST00000476144 297 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 IGKV2D-10-201ENST00000520194 281 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AC107993.1-201ENST00000591343 684 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AC010857.1-201ENST00000606398 594 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AC019278.1-201ENST00000623516 479 ntBASIC6.69□□□□□ -1.34
VPS8Q8N3P4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VPS8Q8N3P4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 SNORA70C-201ENST00000384538 135 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 MIR1179-201ENST00000408703 91 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 CEACAMP8-201ENST00000413902 580 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 BTG4P1-201ENST00000510421 183 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 NPM1P6-201ENST00000521088 871 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 PARP1P2-201ENST00000556806 195 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 AC010547.7-201ENST00000570323 333 ntBASIC6.68□□□□□ -1.34
VPS8Q8N3P4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VPS8Q8N3P4 RNA5SP515-201ENST00000364570 118 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 CEACAMP1-201ENST00000434624 1035 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 OR4C10P-201ENST00000434991 931 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC023509.5-201ENST00000617434 807 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC068724.3-201ENST00000625906 87 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 RNA5SP372-201ENST00000390836 115 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL356095.1-201ENST00000417217 199 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 EIF1P3-201ENST00000423841 334 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 PRELID3BP10-201ENST00000431957 584 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AC079804.1-201ENST00000461922 436 ntBASIC6.67□□□□□ -1.34
VPS8Q8N3P4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VPS8Q8N3P4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC017104.4-201ENST00000636283 1592 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AL121657.1-201ENST00000327215 531 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 ATP5F1P2-201ENST00000398143 760 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC008694.2-201ENST00000517591 306 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AL138721.1-201ENST00000616756 179 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC009704.2-201ENST00000618739 483 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AC090506.2-201ENST00000624521 419 ntBASIC6.66□□□□□ -1.34
VPS8Q8N3P4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms