Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-723P-201ENST00000383973 107 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 RNU6-575P-201ENST00000411326 105 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 MRPS21P5-201ENST00000417885 231 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC005517.2-201ENST00000424673 553 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AMYP1-201ENST00000440059 1023 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 MTCO3P45-201ENST00000443036 613 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 VN1R17P-201ENST00000472048 1090 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC106872.2-201ENST00000494303 480 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 GZMAP1-201ENST00000503054 631 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC018797.1-201ENST00000510791 255 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 SNORA31.13-201ENST00000516624 135 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 SNORA25.17-201ENST00000517184 124 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 TOMM20P1-201ENST00000534518 427 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC024224.1-201ENST00000538284 609 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 YWHABP2-201ENST00000540201 713 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 RPL21P5-201ENST00000554662 472 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AL592436.1-201ENST00000605135 558 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC083806.3-201ENST00000614016 455 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LINC01613-201ENST00000561476 2780 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LYARP1-201ENST00000436977 1501 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 MFSD8-217ENST00000641178 4374 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 VN2R3P-201ENST00000422626 1412 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC073343.1-201ENST00000328239 651 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 PPIAP24-201ENST00000328558 471 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RNU6-223P-201ENST00000362830 107 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RNU6-282P-201ENST00000365357 103 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RNU6-533P-201ENST00000384144 107 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RN7SKP62-201ENST00000384539 329 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RNU4-14P-201ENST00000410858 122 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RN7SKP247-201ENST00000411094 308 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 GSTA6P-201ENST00000424144 582 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC079807.1-201ENST00000429993 481 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 ARL5AP4-201ENST00000430731 512 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 UBBP5-201ENST00000446970 266 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 HMGB1P7-201ENST00000450921 612 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 PCNPP5-201ENST00000452246 481 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC005017.1-201ENST00000482002 490 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC009902.1-201ENST00000519351 183 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms