Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 RNU6-666P-201ENST00000363499 107 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 SNORA70.10-201ENST00000384515 134 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 RN7SKP222-201ENST00000410651 315 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC010385.1-201ENST00000412374 256 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC006466.1-201ENST00000438721 289 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 OR7E125P-201ENST00000443450 846 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 Z80107.2-201ENST00000445127 392 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 RPL31P44-201ENST00000447680 377 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 NPM1P39-201ENST00000449818 867 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC091685.2-201ENST00000454924 864 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 RPS23P1-201ENST00000491662 432 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 BTF3P13-201ENST00000513224 490 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC008033.2-201ENST00000542626 177 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC022884.2-201ENST00000578535 580 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 MIR4509-3-201ENST00000578671 94 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 MIR4480-201ENST00000582492 71 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 MIR4509-2-201ENST00000583920 94 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 FAM25E-202ENST00000608562 189 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 RNA5SP439-201ENST00000617595 124 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 MIR4509-1-201ENST00000618224 94 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC091953.3-201ENST00000623220 236 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC112694.2-201ENST00000623697 768 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AC132825.7-201ENST00000638744 335 ntBASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 RNU6-298P-201ENST00000390888 96 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AL021331.1-201ENST00000402817 582 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 HMGB1P13-201ENST00000406019 642 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 SNORA77-201ENST00000408716 125 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AF186996.5-201ENST00000418098 904 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 OR5M12P-201ENST00000423388 929 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC073648.4-201ENST00000442655 781 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 CASP3P1-201ENST00000446037 609 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 RPL7P16-201ENST00000479738 738 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC093815.1-201ENST00000508637 280 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 snoU109.6-201ENST00000516831 118 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 PCNPP1-201ENST00000552501 511 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 EDDM3DP-201ENST00000554692 434 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC012254.4-201ENST00000588843 273 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AL049844.2-201ENST00000604280 628 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC018618.2-201ENST00000604770 446 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC005084.1-201ENST00000605160 304 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC013244.3-201ENST00000605614 388 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AL121890.2-201ENST00000617644 465 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC087385.3-201ENST00000620477 187 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC010435.1-201ENST00000623353 1177 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 AC093849.1-201ENST00000563631 2209 ntBASIC5.31□□□□□ -1.56
SCN4BQ8IWT1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms