Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MIR195-201ENST00000385194 87 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 RNA5SP146-201ENST00000410743 123 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC006065.1-201ENST00000422539 802 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 RPS26P2-201ENST00000440331 348 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 TPT1P13-201ENST00000449760 499 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC090142.1-201ENST00000465776 462 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC107015.1-201ENST00000466902 747 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 RN7SL817P-201ENST00000480777 288 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 RN7SKP92-201ENST00000517266 244 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC067805.1-201ENST00000559344 470 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AL008729.2-201ENST00000606393 473 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC117490.2-201ENST00000610042 594 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC234782.5-201ENST00000617723 324 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 A2MP1-204ENST00000566278 4130 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC017104.4-201ENST00000636283 1592 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 OR4K15-201ENST00000305051 1216 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 RNU6-729P-201ENST00000384399 107 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 DHFRP5-201ENST00000406944 564 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 MTND3P20-201ENST00000407663 186 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 CENPIP1-201ENST00000425713 902 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 MTND4LP2-201ENST00000502312 285 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 HIGD1AP5-201ENST00000529959 259 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AP001781.1-201ENST00000530977 207 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 GSTP1P1-201ENST00000548078 319 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AC012467.1-201ENST00000607740 256 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AC011815.3-201ENST00000624194 473 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 U3.53-201ENST00000628922 216 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
RFWD3Q6PCD5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 RNA5SP397-201ENST00000391323 118 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 RPS4XP9-201ENST00000405151 780 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 FAR2P2-201ENST00000413041 594 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 SEPT7P8-201ENST00000413308 775 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 FAR2P4-202ENST00000425399 584 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 RPEP3-201ENST00000425462 676 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AK3P4-201ENST00000504283 583 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC007016.1-201ENST00000512110 244 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms