Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC006512.2-201ENST00000543250 486 ntBASIC5.91□□□□□ -1.46
YBX1P67809 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.91□□□□□ -1.46
YBX1P67809 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 GTF2IP22-201ENST00000554443 182 ntBASIC5.91□□□□□ -1.46
YBX1P67809 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.91□□□□□ -1.46
YBX1P67809 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 MIR4443-201ENST00000585052 53 ntBASIC5.91□□□□□ -1.46
YBX1P67809 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 AC068020.1-201ENST00000594215 661 ntBASIC5.91□□□□□ -1.46
YBX1P67809 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.91□□□□□ -1.46
YBX1P67809 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.91□□□□□ -1.46
YBX1P67809 AC130352.1-201ENST00000602979 661 ntBASIC5.91□□□□□ -1.46
YBX1P67809 AP005137.2-201ENST00000609238 400 ntBASIC5.91□□□□□ -1.46
YBX1P67809 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 RN7SL261P-201ENST00000613441 282 ntBASIC5.91□□□□□ -1.46
YBX1P67809 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.91□□□□□ -1.46
YBX1P67809 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
YBX1P67809 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.91□□□□□ -1.46
YBX1P67809 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
YBX1P67809 IFIT1P1-201ENST00000400497 1449 ntBASIC5.91□□□□□ -1.46
YBX1P67809 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.91□□□□□ -1.46
YBX1P67809 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 AC024651.2-201ENST00000562480 2098 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
YBX1P67809 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
YBX1P67809 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
YBX1P67809 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 Y_RNA.311-201ENST00000365068 96 ntBASIC5.9□□□□□ -1.46
YBX1P67809 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
YBX1P67809 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
YBX1P67809 AL096829.1-201ENST00000413677 457 ntBASIC5.9□□□□□ -1.46
YBX1P67809 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 AL139413.1-201ENST00000421309 217 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC233728.2-201ENST00000425348 757 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 USP9YP8-201ENST00000441913 500 ntBASIC5.9□□□□□ -1.46
YBX1P67809 ARL5AP2-201ENST00000444698 533 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC002553.3-201ENST00000453002 341 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.9□□□□□ -1.46
YBX1P67809 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 RPL5P24-201ENST00000463742 885 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.9□□□□□ -1.46
YBX1P67809 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
YBX1P67809 ARL4AP2-201ENST00000507378 601 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC090958.1-201ENST00000511122 351 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 OR5AL2P-201ENST00000532185 920 ntBASIC5.9□□□□□ -1.46
YBX1P67809 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
YBX1P67809 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.9□□□□□ -1.46
YBX1P67809 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.9□□□□□ -1.46
YBX1P67809 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.9□□□□□ -1.46
YBX1P67809 AC006504.3-201ENST00000586818 523 ntBASIC5.9□□□□□ -1.46
YBX1P67809 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.9□□□□□ -1.46
YBX1P67809 SEPT7P9-203ENST00000604116 343 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC133552.5-201ENST00000604266 540 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC087045.1-201ENST00000605856 382 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.9□□□□□ -1.46
YBX1P67809 AC092681.3-201ENST00000609463 678 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC023158.2-201ENST00000614876 543 ntBASIC5.9□□□□□ -1.46
YBX1P67809 MIR3688-2-201ENST00000636963 87 ntBASIC5.9□□□□□ -1.46
YBX1P67809 AC116667.2-201ENST00000641075 823 ntBASIC5.9□□□□□ -1.46
YBX1P67809 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.9□□□□□ -1.46
YBX1P67809 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.9□□□□□ -1.47
YBX1P67809 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.9□□□□□ -1.47
YBX1P67809 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
YBX1P67809 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
YBX1P67809 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.9□□□□□ -1.47
YBX1P67809 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.9□□□□□ -1.47
YBX1P67809 AC104966.1-201ENST00000467010 1464 ntBASIC5.9□□□□□ -1.47
YBX1P67809 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
YBX1P67809 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms