Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.39□□□□□ -1.71
VSX2P58304 CASC19-204ENST00000641001 2055 ntBASIC4.39□□□□□ -1.71
VSX2P58304 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.39□□□□□ -1.71
VSX2P58304 AC245100.2-201ENST00000454544 1679 ntBASIC4.39□□□□□ -1.71
VSX2P58304 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VSX2P58304 AC021146.4-201ENST00000309229 279 ntBASIC4.39□□□□□ -1.71
VSX2P58304 OR1F12-201ENST00000402365 945 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AL592291.1-201ENST00000403830 352 ntBASIC4.39□□□□□ -1.71
VSX2P58304 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VSX2P58304 PTP4A1P1-201ENST00000420539 515 ntBASIC4.39□□□□□ -1.71
VSX2P58304 UQCRBP1-201ENST00000421129 336 ntBASIC4.39□□□□□ -1.71
VSX2P58304 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.39□□□□□ -1.71
VSX2P58304 AC104651.2-201ENST00000447549 528 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.39□□□□□ -1.71
VSX2P58304 AL162591.2-201ENST00000449634 317 ntBASIC4.39□□□□□ -1.71
VSX2P58304 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.39□□□□□ -1.71
VSX2P58304 snoU13.1-201ENST00000459157 104 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AC108751.2-201ENST00000469993 231 ntBASIC4.39□□□□□ -1.71
VSX2P58304 SNORA26.10-201ENST00000516427 141 ntBASIC4.39□□□□□ -1.71
VSX2P58304 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.39□□□□□ -1.71
VSX2P58304 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.39□□□□□ -1.71
VSX2P58304 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.39□□□□□ -1.71
VSX2P58304 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.39□□□□□ -1.71
VSX2P58304 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.39□□□□□ -1.71
VSX2P58304 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.39□□□□□ -1.71
VSX2P58304 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.39□□□□□ -1.71
VSX2P58304 ELOCP28-201ENST00000590044 317 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AF230666.2-201ENST00000602328 725 ntBASIC4.39□□□□□ -1.71
VSX2P58304 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.39□□□□□ -1.71
VSX2P58304 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.39□□□□□ -1.71
VSX2P58304 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.39□□□□□ -1.71
VSX2P58304 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
VSX2P58304 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.39□□□□□ -1.71
VSX2P58304 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VSX2P58304 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
VSX2P58304 DDX18P3-201ENST00000404856 2007 ntBASIC4.38□□□□□ -1.71
VSX2P58304 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VSX2P58304 AL355852.1-201ENST00000454081 1771 ntBASIC4.38□□□□□ -1.71
VSX2P58304 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VSX2P58304 MAPK10-286ENST00000641208 8747 ntBASIC4.38□□□□□ -1.71
VSX2P58304 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.38□□□□□ -1.71
VSX2P58304 CYCSP10-201ENST00000417973 294 ntBASIC4.38□□□□□ -1.71
VSX2P58304 RPS12P10-201ENST00000427031 377 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.38□□□□□ -1.71
VSX2P58304 AC068287.1-201ENST00000430283 295 ntBASIC4.38□□□□□ -1.71
VSX2P58304 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AL935212.3-201ENST00000450729 284 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.38□□□□□ -1.71
VSX2P58304 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.38□□□□□ -1.71
VSX2P58304 ISCUP1-201ENST00000454451 448 ntBASIC4.38□□□□□ -1.71
VSX2P58304 MTND2P28-201ENST00000457540 1044 ntBASIC4.38□□□□□ -1.71
VSX2P58304 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.38□□□□□ -1.71
VSX2P58304 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC108043.1-201ENST00000512696 574 ntBASIC4.38□□□□□ -1.71
VSX2P58304 TCP11X3P-202ENST00000514289 1254 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AF186190.1-201ENST00000517470 480 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.38□□□□□ -1.71
VSX2P58304 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.38□□□□□ -1.71
VSX2P58304 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.38□□□□□ -1.71
VSX2P58304 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.38□□□□□ -1.71
VSX2P58304 RN7SL176P-201ENST00000580352 264 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC068790.4-201ENST00000602474 263 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC130352.1-201ENST00000602979 661 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC233280.2-201ENST00000603917 1070 ntBASIC4.38□□□□□ -1.71
VSX2P58304 SNORA35B-201ENST00000607417 129 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC019193.2-201ENST00000610012 634 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AC100847.1-201ENST00000611316 481 ntBASIC4.38□□□□□ -1.71
VSX2P58304 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.38□□□□□ -1.71
VSX2P58304 AL133243.1-201ENST00000614487 366 ntBASIC4.38□□□□□ -1.71
VSX2P58304 MIR7641-1-201ENST00000627518 61 ntBASIC4.38□□□□□ -1.71
VSX2P58304 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VSX2P58304 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.38□□□□□ -1.71
VSX2P58304 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
VSX2P58304 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VSX2P58304 MTND5P23-201ENST00000430812 1655 ntBASIC4.38□□□□□ -1.71
VSX2P58304 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VSX2P58304 AL592148.3-201ENST00000608771 2646 ntBASIC4.38□□□□□ -1.71
VSX2P58304 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms