Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.46□□□□□ -1.7
PKNOX1P55347 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PKNOX1P55347 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PKNOX1P55347 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PKNOX1P55347 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PKNOX1P55347 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.46□□□□□ -1.7
PKNOX1P55347 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PKNOX1P55347 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PKNOX1P55347 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC107027.3-201ENST00000565095 3473 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 RNU6-386P-201ENST00000362650 107 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 RNU4-23P-201ENST00000362839 140 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.45□□□□□ -1.7
PKNOX1P55347 GTF3AP1-201ENST00000416942 1004 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AC062016.2-201ENST00000420950 676 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 OR2X1P-201ENST00000421144 687 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 UBE2V2P3-201ENST00000433562 437 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 RPS27AP15-201ENST00000447672 466 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AL133244.1-201ENST00000456007 258 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 RPL7AP6-201ENST00000477943 801 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 RPL7P16-201ENST00000479738 738 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.45□□□□□ -1.7
PKNOX1P55347 PDCD5P1-201ENST00000543528 309 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC009117.1-201ENST00000563948 554 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AL121834.1-201ENST00000572284 509 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.45□□□□□ -1.7
PKNOX1P55347 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AL512782.1-201ENST00000603093 364 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC015722.2-201ENST00000622210 551 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AC002044.3-201ENST00000623314 541 ntBASIC4.45□□□□□ -1.7
PKNOX1P55347 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PKNOX1P55347 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.45□□□□□ -1.7
PKNOX1P55347 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PKNOX1P55347 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PKNOX1P55347 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.45□□□□□ -1.7
PKNOX1P55347 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.44□□□□□ -1.7
PKNOX1P55347 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.44□□□□□ -1.7
PKNOX1P55347 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.44□□□□□ -1.7
PKNOX1P55347 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 RNU1-108P-201ENST00000362556 161 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 ATP5F1P2-201ENST00000398143 760 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 SDHCP2-201ENST00000398565 501 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 GTF2IP2-201ENST00000424290 697 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 MAPRE1P3-201ENST00000435438 796 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 SUMO2P1-206ENST00000445436 284 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 PSMC1P13-201ENST00000458195 985 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 SCARNA10-201ENST00000459255 330 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.44□□□□□ -1.7
PKNOX1P55347 RPS26P28-201ENST00000470806 348 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC104763.1-201ENST00000475274 360 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC090013.1-201ENST00000485147 480 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 RNU2-30P-201ENST00000516209 141 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.44□□□□□ -1.7
PKNOX1P55347 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.44□□□□□ -1.7
PKNOX1P55347 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 AC125612.1-201ENST00000547580 377 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC008147.3-201ENST00000548666 354 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.44□□□□□ -1.7
PKNOX1P55347 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 U3.53-201ENST00000628922 216 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 AC006971.1-201ENST00000407916 4486 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 CR788268.1-201ENST00000603931 1809 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 CIR1P2-201ENST00000514821 1342 ntBASIC4.44□□□□□ -1.7
PKNOX1P55347 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PKNOX1P55347 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PKNOX1P55347 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.43□□□□□ -1.7
PKNOX1P55347 HSPA8P17-201ENST00000427029 1382 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms