Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH6P55285 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH6P55285 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH6P55285 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH6P55285 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH6P55285 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH6P55285 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH6P55285 OR14L1P-202ENST00000641545 3009 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC107027.3-201ENST00000565095 3473 ntBASIC4.71□□□□□ -1.66
CDH6P55285 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH6P55285 OR52B1P-201ENST00000316506 909 ntBASIC4.71□□□□□ -1.66
CDH6P55285 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH6P55285 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH6P55285 SDHCP2-201ENST00000398565 501 ntBASIC4.71□□□□□ -1.66
CDH6P55285 RNU2-50P-201ENST00000410494 143 ntBASIC4.71□□□□□ -1.66
CDH6P55285 CEACAMP8-201ENST00000413902 580 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH6P55285 RPS12P10-201ENST00000427031 377 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AL121578.1-201ENST00000428051 892 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH6P55285 RPL23AP93-201ENST00000440847 484 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH6P55285 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 RPL23AP65-201ENST00000475608 468 ntBASIC4.71□□□□□ -1.66
CDH6P55285 IGLV2-34-201ENST00000490007 283 ntBASIC4.71□□□□□ -1.66
CDH6P55285 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH6P55285 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CDH6P55285 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH6P55285 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH6P55285 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 GSTP1P1-201ENST00000548078 319 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH6P55285 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 AC100827.5-201ENST00000615883 426 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC244517.3-201ENST00000616254 1235 ntBASIC4.71□□□□□ -1.66
CDH6P55285 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH6P55285 NXPH1-205ENST00000602349 1953 ntBASIC4.71□□□□□ -1.66
CDH6P55285 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH6P55285 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CDH6P55285 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 AC139769.1-204ENST00000472297 1931 ntBASIC4.7□□□□□ -1.66
CDH6P55285 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH6P55285 RNU1-20P-201ENST00000363314 162 ntBASIC4.7□□□□□ -1.66
CDH6P55285 RNU1-63P-201ENST00000383902 164 ntBASIC4.7□□□□□ -1.66
CDH6P55285 RNA5SP397-201ENST00000391323 118 ntBASIC4.7□□□□□ -1.66
CDH6P55285 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CDH6P55285 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH6P55285 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH6P55285 RAD23BP1-201ENST00000421404 1227 ntBASIC4.7□□□□□ -1.66
CDH6P55285 RPL23AP25-201ENST00000430973 463 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH6P55285 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH6P55285 YWHAZP2-201ENST00000440317 728 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH6P55285 AC010326.1-201ENST00000462726 602 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AC105918.1-201ENST00000474399 838 ntBASIC4.7□□□□□ -1.66
CDH6P55285 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH6P55285 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH6P55285 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
CDH6P55285 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH6P55285 MIR4443-201ENST00000585052 53 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AC090181.2-201ENST00000602975 672 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH6P55285 AL161616.1-201ENST00000611867 286 ntBASIC4.7□□□□□ -1.66
CDH6P55285 MIR6780A-201ENST00000615089 68 ntBASIC4.7□□□□□ -1.66
CDH6P55285 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH6P55285 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH6P55285 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH6P55285 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH6P55285 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH6P55285 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH6P55285 OR10AB1P-202ENST00000641219 1686 ntBASIC4.7□□□□□ -1.66
CDH6P55285 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH6P55285 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH6P55285 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH6P55285 AL049697.2-201ENST00000403708 294 ntBASIC4.69□□□□□ -1.66
CDH6P55285 MTND4LP13-201ENST00000425022 298 ntBASIC4.69□□□□□ -1.66
CDH6P55285 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 ARL4AP3-201ENST00000441452 574 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH6P55285 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 AL513533.1-201ENST00000453728 415 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH6P55285 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms