Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCS2P54868 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS2P54868 HSFY6P-201ENST00000445573 403 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCS2P54868 MTND6P5-201ENST00000448266 512 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCS2P54868 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS2P54868 OR8R1P-201ENST00000543943 764 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AC015912.2-201ENST00000571053 181 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 BPIFA4P-203ENST00000603168 689 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AC079587.1-201ENST00000603846 277 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AC093671.1-201ENST00000624981 2929 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HMGCS2P54868 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS2P54868 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 AC133552.1-201ENST00000569988 4007 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGCS2P54868 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 MIR372-201ENST00000362225 67 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGCS2P54868 U3.23-201ENST00000391132 200 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 AL583835.1-201ENST00000399570 407 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 CASKP1-201ENST00000412870 582 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 RPL36AP36-201ENST00000418616 301 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGCS2P54868 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 RPL21P129-201ENST00000491732 478 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 AC008958.1-201ENST00000511047 682 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS2P54868 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS2P54868 AC022916.3-201ENST00000592961 742 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 AP005212.4-201ENST00000614206 710 ntBASIC5.14□□□□□ -1.59
HMGCS2P54868 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS2P54868 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS2P54868 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS2P54868 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS2P54868 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS2P54868 AC139769.1-204ENST00000472297 1931 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS2P54868 AL031595.2-201ENST00000624215 19071 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AL445189.1-201ENST00000405722 338 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 ARAFP1-201ENST00000422172 605 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS2P54868 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 SNORA84-201ENST00000459229 133 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS2P54868 RPL35P6-201ENST00000490024 372 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS2P54868 MED28P5-201ENST00000528254 438 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGCS2P54868 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 TVP23BP1-201ENST00000557500 617 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 MIR8059-201ENST00000620427 81 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AC008785.1-201ENST00000624475 456 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 AL603750.1-201ENST00000624216 1717 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 AC020633.1-201ENST00000468439 2247 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS2P54868 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HMGCS2P54868 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS2P54868 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.13□□□□□ -1.59
HMGCS2P54868 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS2P54868 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC092376.2-201ENST00000622621 4116 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS2P54868 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HMGCS2P54868 AC073136.1-201ENST00000449426 2884 ntBASIC5.12□□□□□ -1.59
HMGCS2P54868 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS2P54868 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms