Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC108032.1-201ENST00000416706 207 ntBASIC5.33□□□□□ -1.56
NUP98P52948 AL162151.2-201ENST00000448875 158 ntBASIC5.33□□□□□ -1.56
NUP98P52948 ABCF2P2-201ENST00000450549 296 ntBASIC5.33□□□□□ -1.56
NUP98P52948 RN7SL132P-201ENST00000478131 296 ntBASIC5.33□□□□□ -1.56
NUP98P52948 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP98P52948 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP98P52948 AC008966.2-201ENST00000606157 453 ntBASIC5.33□□□□□ -1.56
NUP98P52948 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP98P52948 AC008785.1-201ENST00000624475 456 ntBASIC5.33□□□□□ -1.56
NUP98P52948 AC112200.1-201ENST00000625015 234 ntBASIC5.33□□□□□ -1.56
NUP98P52948 RLIMP1-201ENST00000339626 1680 ntBASIC5.33□□□□□ -1.56
NUP98P52948 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 AP002512.4-202ENST00000641599 4530 ntBASIC5.33□□□□□ -1.56
NUP98P52948 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
NUP98P52948 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP98P52948 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP98P52948 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP98P52948 MAPK10-286ENST00000641208 8747 ntBASIC5.33□□□□□ -1.56
NUP98P52948 CCAT2-201ENST00000630920 1752 ntBASIC5.32□□□□□ -1.56
NUP98P52948 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 ENSAP1-201ENST00000392855 326 ntBASIC5.32□□□□□ -1.56
NUP98P52948 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.32□□□□□ -1.56
NUP98P52948 RNU6-628P-201ENST00000410675 107 ntBASIC5.32□□□□□ -1.56
NUP98P52948 RPS21P8-201ENST00000413365 247 ntBASIC5.32□□□□□ -1.56
NUP98P52948 CEACAMP8-201ENST00000413902 580 ntBASIC5.32□□□□□ -1.56
NUP98P52948 OR13Z1P-201ENST00000416141 834 ntBASIC5.32□□□□□ -1.56
NUP98P52948 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AL117339.2-201ENST00000430475 180 ntBASIC5.32□□□□□ -1.56
NUP98P52948 CEACAMP1-201ENST00000434624 1035 ntBASIC5.32□□□□□ -1.56
NUP98P52948 RPS29P7-201ENST00000439662 171 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP98P52948 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP98P52948 SAP18P1-201ENST00000512058 390 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP98P52948 AC245389.1-201ENST00000605141 529 ntBASIC5.32□□□□□ -1.56
NUP98P52948 MIR92B-201ENST00000607575 96 ntBASIC5.32□□□□□ -1.56
NUP98P52948 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP98P52948 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AC116667.1-201ENST00000604855 2072 ntBASIC5.32□□□□□ -1.56
NUP98P52948 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NUP98P52948 MAPK10-372ENST00000641954 3413 ntBASIC5.32□□□□□ -1.56
NUP98P52948 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP98P52948 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 AP000357.1-201ENST00000409926 1165 ntBASIC5.32□□□□□ -1.56
NUP98P52948 NPM1P36-201ENST00000415681 835 ntBASIC5.32□□□□□ -1.56
NUP98P52948 OR5BE1P-201ENST00000425977 939 ntBASIC5.32□□□□□ -1.56
NUP98P52948 RPS4XP4-201ENST00000443195 763 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AC079804.1-201ENST00000461922 436 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AC034236.1-201ENST00000469891 373 ntBASIC5.32□□□□□ -1.56
NUP98P52948 TVP23BP1-201ENST00000557500 617 ntBASIC5.32□□□□□ -1.56
NUP98P52948 AC120057.2-201ENST00000571520 271 ntBASIC5.32□□□□□ -1.56
NUP98P52948 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP98P52948 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP98P52948 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP98P52948 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP98P52948 OR5BE1P-202ENST00000641168 1176 ntBASIC5.32□□□□□ -1.56
NUP98P52948 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP98P52948 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP98P52948 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 THAP12P5-201ENST00000405864 2275 ntBASIC5.31□□□□□ -1.56
NUP98P52948 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NUP98P52948 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP98P52948 IQCB2P-201ENST00000401788 1633 ntBASIC5.31□□□□□ -1.56
NUP98P52948 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
NUP98P52948 RNA5SP175-201ENST00000364275 119 ntBASIC5.31□□□□□ -1.56
NUP98P52948 AL359837.1-201ENST00000381357 287 ntBASIC5.31□□□□□ -1.56
NUP98P52948 MIR23B-201ENST00000384832 97 ntBASIC5.31□□□□□ -1.56
NUP98P52948 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NUP98P52948 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP98P52948 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP98P52948 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP98P52948 AC115285.1-201ENST00000424879 736 ntBASIC5.31□□□□□ -1.56
NUP98P52948 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP98P52948 AC091959.2-201ENST00000477363 321 ntBASIC5.31□□□□□ -1.56
NUP98P52948 PARP4P3-201ENST00000510265 317 ntBASIC5.31□□□□□ -1.56
NUP98P52948 RNA5SP360-201ENST00000516555 118 ntBASIC5.31□□□□□ -1.56
NUP98P52948 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP98P52948 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP98P52948 AL021997.2-201ENST00000615674 271 ntBASIC5.31□□□□□ -1.56
NUP98P52948 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP98P52948 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NUP98P52948 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP98P52948 AC005261.2-201ENST00000593427 4258 ntBASIC5.31□□□□□ -1.56
NUP98P52948 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
NUP98P52948 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms