Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 RPS29P9-201ENST00000440360 171 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 FHP1-201ENST00000442741 703 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 RPL7P61-201ENST00000451721 751 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL645937.3-201ENST00000453647 936 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC037198.2-201ENST00000478845 733 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 RPL5P22-201ENST00000480199 884 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC005412.2-201ENST00000492004 341 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AP001372.4-201ENST00000524889 472 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC008033.2-201ENST00000542626 177 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 EDDM3DP-201ENST00000554692 434 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 SETP1-201ENST00000556014 845 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 RN7SL339P-201ENST00000580597 296 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC011840.5-201ENST00000582125 771 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 MEMO1P5-201ENST00000604810 406 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC018695.5-201ENST00000605872 315 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC018754.1-201ENST00000607486 925 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL049539.1-201ENST00000611964 459 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC008147.4-201ENST00000617570 1204 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC078880.5-201ENST00000617845 421 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC021106.3-201ENST00000623925 531 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC073342.3-201ENST00000624211 193 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL353662.3-201ENST00000625131 237 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC063976.2-201ENST00000425667 3556 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL450326.2-201ENST00000421913 1962 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLCNKAP51800 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 RN7SKP95-201ENST00000362860 303 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 RNU6-354P-201ENST00000383862 107 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 RNU6-481P-201ENST00000384194 107 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 RNU6-610P-201ENST00000384264 107 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AL034403.1-201ENST00000399414 885 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 RN7SKP97-201ENST00000410966 333 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AL445183.3-201ENST00000414168 502 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 PCNPP4-201ENST00000414817 517 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AL157827.1-201ENST00000447622 132 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 IGHV5-78-201ENST00000450948 295 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC243772.1-201ENST00000451620 410 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC008379.1-201ENST00000463655 464 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 AC140172.1-201ENST00000502928 141 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 PRELID3BP6-201ENST00000503839 571 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCNKAP51800 RNA5SP228-201ENST00000516232 133 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.94□□□□□ -1.62
CLCNKAP51800 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 NDUFB4P11-201ENST00000560510 395 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC040958.1-201ENST00000561102 201 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 OR1F2P-201ENST00000570470 933 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms