Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 AL359715.4-201ENST00000606629 1436 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AP000943.4-201ENST00000622912 357 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 AC010435.1-201ENST00000623353 1177 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 MIR7641-1-201ENST00000627518 61 ntBASIC5.27□□□□□ -1.57
CLCN3P51790 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCN3P51790 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN3P51790 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN3P51790 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 UGT2B26P-201ENST00000508672 1613 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLCN3P51790 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 TCP1P3-201ENST00000414406 1498 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 SOCS5P3-201ENST00000425115 1576 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 RLIMP2-201ENST00000427891 1563 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 MAPK10-328ENST00000641553 4009 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.26□□□□□ -1.57
CLCN3P51790 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLCN3P51790 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 AC104297.1-201ENST00000393779 870 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 RPL23AP4-201ENST00000427757 463 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 PTP4A1P3-201ENST00000433661 420 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 CYCSP24-201ENST00000445119 316 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 AC021660.1-201ENST00000465006 554 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AC107015.1-201ENST00000466902 747 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 SYT14P1-201ENST00000481459 721 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 RN7SL346P-201ENST00000491561 294 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AC073073.1-201ENST00000493920 463 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.26□□□□□ -1.57
CLCN3P51790 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 RNU1-6P-201ENST00000516290 144 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 AC025918.2-201ENST00000558683 763 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AP003117.1-201ENST00000602771 554 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 MTATP6P2-201ENST00000603319 678 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AL139022.2-201ENST00000606934 443 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.26□□□□□ -1.57
CLCN3P51790 AC022306.3-201ENST00000619930 550 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 AC012414.7-202ENST00000622705 1090 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 FRG1DP-201ENST00000635586 771 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 TCP11X1-202ENST00000622971 1372 ntBASIC5.26□□□□□ -1.57
CLCN3P51790 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.26□□□□□ -1.57
CLCN3P51790 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLCN3P51790 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 AP005432.1-201ENST00000580891 3485 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AL136520.1-201ENST00000600311 1322 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 SNORA70F-201ENST00000384142 135 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLCN3P51790 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLCN3P51790 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 TATDN1P1-201ENST00000414123 891 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.25□□□□□ -1.57
CLCN3P51790 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 DNAJC19P7-201ENST00000428811 344 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AL451139.1-201ENST00000434718 346 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 MOB1AP2-201ENST00000446060 614 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 AC079168.2-201ENST00000453977 416 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.25□□□□□ -1.57
CLCN3P51790 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms