Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.78□□□□□ -1.32
USP11P51784 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 AL390816.3-201ENST00000604527 1066 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC012360.2-201ENST00000609349 391 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 MIR6861-201ENST00000618657 64 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC099063.3-201ENST00000642066 185 ntBASIC6.78□□□□□ -1.32
USP11P51784 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 AC007342.7-201ENST00000624610 2337 ntBASIC6.78□□□□□ -1.32
USP11P51784 AL049634.1-201ENST00000453770 1720 ntBASIC6.78□□□□□ -1.32
USP11P51784 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
USP11P51784 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.77□□□□□ -1.32
USP11P51784 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 AC079753.1-201ENST00000623243 3868 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USP11P51784 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 RNA5SP27-201ENST00000363839 119 ntBASIC6.77□□□□□ -1.33
USP11P51784 RNU4-12P-201ENST00000365233 139 ntBASIC6.77□□□□□ -1.33
USP11P51784 RNA5SP211-201ENST00000365516 117 ntBASIC6.77□□□□□ -1.33
USP11P51784 MIR181A1-201ENST00000385026 110 ntBASIC6.77□□□□□ -1.33
USP11P51784 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 RNA5SP80-201ENST00000410475 111 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC002524.1-201ENST00000411687 547 ntBASIC6.77□□□□□ -1.33
USP11P51784 RPL26P37-201ENST00000411983 438 ntBASIC6.77□□□□□ -1.33
USP11P51784 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 AC009237.5-201ENST00000414271 501 ntBASIC6.77□□□□□ -1.33
USP11P51784 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 BTF3P9-201ENST00000418784 283 ntBASIC6.77□□□□□ -1.33
USP11P51784 RNGTTP1-201ENST00000420965 728 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC066692.1-201ENST00000421721 457 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL136231.1-201ENST00000429407 730 ntBASIC6.77□□□□□ -1.33
USP11P51784 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 USP9YP8-201ENST00000441913 500 ntBASIC6.77□□□□□ -1.33
USP11P51784 ARL5AP2-201ENST00000444698 533 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 REG1CP-206ENST00000447469 496 ntBASIC6.77□□□□□ -1.33
USP11P51784 FAR2P1-206ENST00000449736 709 ntBASIC6.77□□□□□ -1.33
USP11P51784 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 OR6C5P-201ENST00000452388 923 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 MTND1P11-201ENST00000456661 876 ntBASIC6.77□□□□□ -1.33
USP11P51784 SLC25A51P1-201ENST00000468432 871 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL122020.1-201ENST00000472287 459 ntBASIC6.77□□□□□ -1.33
USP11P51784 UBTFL6-201ENST00000477929 1024 ntBASIC6.77□□□□□ -1.33
USP11P51784 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC091951.2-201ENST00000500762 203 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC006499.5-201ENST00000505037 514 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.77□□□□□ -1.33
USP11P51784 RNA5SP438-201ENST00000516561 112 ntBASIC6.77□□□□□ -1.33
USP11P51784 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.77□□□□□ -1.33
USP11P51784 WBP1LP3-201ENST00000523033 208 ntBASIC6.77□□□□□ -1.33
USP11P51784 AP000648.1-201ENST00000529682 397 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.77□□□□□ -1.33
USP11P51784 NANOGNBP2-201ENST00000544753 553 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.77□□□□□ -1.33
USP11P51784 AC124947.2-202ENST00000552735 133 ntBASIC6.77□□□□□ -1.33
USP11P51784 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 HMGN2P47-201ENST00000559378 272 ntBASIC6.77□□□□□ -1.33
USP11P51784 MIR4776-2-201ENST00000580204 80 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 BMS1P7-201ENST00000602440 1052 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC145423.1-201ENST00000605712 336 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC087045.1-201ENST00000605856 382 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC106028.5-201ENST00000610332 395 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.77□□□□□ -1.33
USP11P51784 AL136981.2-201ENST00000617319 734 ntBASIC6.77□□□□□ -1.33
USP11P51784 AL355974.3-201ENST00000617383 467 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC112204.3-201ENST00000623822 332 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.77□□□□□ -1.33
USP11P51784 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.77□□□□□ -1.33
USP11P51784 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 MTND4P12-201ENST00000498999 1377 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC027088.4-201ENST00000611559 1947 ntBASIC6.77□□□□□ -1.33
USP11P51784 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.77□□□□□ -1.33
USP11P51784 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
USP11P51784 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USP11P51784 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms