Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR8G7P-201ENST00000616658 848 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AC015871.5-202ENST00000623252 701 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AP003497.2-201ENST00000624220 967 ntBASIC6.31□□□□□ -1.4
MRE11P49959 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 ZNF90P1-201ENST00000480493 1951 ntBASIC6.31□□□□□ -1.4
MRE11P49959 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 SMG1P7-201ENST00000565246 2704 ntBASIC6.3□□□□□ -1.4
MRE11P49959 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 RNU4-68P-201ENST00000364314 141 ntBASIC6.3□□□□□ -1.4
MRE11P49959 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.3□□□□□ -1.4
MRE11P49959 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 Y_RNA.505-201ENST00000384489 102 ntBASIC6.3□□□□□ -1.4
MRE11P49959 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MRE11P49959 RNU6-1242P-201ENST00000391052 103 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AL078599.1-201ENST00000402075 293 ntBASIC6.3□□□□□ -1.4
MRE11P49959 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.3□□□□□ -1.4
MRE11P49959 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 AC012519.1-201ENST00000424588 610 ntBASIC6.3□□□□□ -1.4
MRE11P49959 OR2AH1P-201ENST00000425717 928 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 AL160175.1-201ENST00000428124 247 ntBASIC6.3□□□□□ -1.4
MRE11P49959 VN1R54P-201ENST00000435210 1049 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 RAB9AP5-201ENST00000437794 597 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AC073052.1-201ENST00000440417 714 ntBASIC6.3□□□□□ -1.4
MRE11P49959 RAB9AP2-201ENST00000443911 597 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 AL596266.1-201ENST00000448132 400 ntBASIC6.3□□□□□ -1.4
MRE11P49959 BUD31P2-201ENST00000449374 300 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 AC105918.1-201ENST00000474399 838 ntBASIC6.3□□□□□ -1.4
MRE11P49959 RPS12P31-201ENST00000491419 398 ntBASIC6.3□□□□□ -1.4
MRE11P49959 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.3□□□□□ -1.4
MRE11P49959 AC074255.1-201ENST00000511259 501 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 GCSHP4-201ENST00000538792 439 ntBASIC6.3□□□□□ -1.4
MRE11P49959 BNIP3P1-201ENST00000547295 580 ntBASIC6.3□□□□□ -1.4
MRE11P49959 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.3□□□□□ -1.4
MRE11P49959 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 MIR4436B2-201ENST00000581415 91 ntBASIC6.3□□□□□ -1.4
MRE11P49959 MIR4436B1-201ENST00000583272 91 ntBASIC6.3□□□□□ -1.4
MRE11P49959 SS18L2P2-201ENST00000583960 235 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.3□□□□□ -1.4
MRE11P49959 AC022079.2-201ENST00000619739 566 ntBASIC6.3□□□□□ -1.4
MRE11P49959 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.3□□□□□ -1.4
MRE11P49959 AL049536.1-201ENST00000625043 744 ntBASIC6.3□□□□□ -1.4
MRE11P49959 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MRE11P49959 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MRE11P49959 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
MRE11P49959 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.3□□□□□ -1.4
MRE11P49959 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.3□□□□□ -1.4
MRE11P49959 PSG10P-201ENST00000501199 1500 ntBASIC6.3□□□□□ -1.4
MRE11P49959 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MRE11P49959 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MRE11P49959 RNU6-252P-201ENST00000363232 107 ntBASIC6.29□□□□□ -1.4
MRE11P49959 RNU6-1214P-201ENST00000363650 109 ntBASIC6.29□□□□□ -1.4
MRE11P49959 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MRE11P49959 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 Y_RNA.436-201ENST00000384097 102 ntBASIC6.29□□□□□ -1.4
MRE11P49959 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 AL132875.1-201ENST00000403623 949 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC098592.2-201ENST00000413158 265 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms