Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
LHX1P48742 uc_338.18-201ENST00000615451 175 ntBASIC5□□□□□ -1.61
LHX1P48742 AC015914.2-201ENST00000618167 288 ntBASIC5□□□□□ -1.61
LHX1P48742 MIR7703-201ENST00000620784 77 ntBASIC5□□□□□ -1.61
LHX1P48742 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
LHX1P48742 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5□□□□□ -1.61
LHX1P48742 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LHX1P48742 ZNF137P-201ENST00000456718 1920 ntBASIC4.99□□□□□ -1.61
LHX1P48742 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LHX1P48742 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 AP001002.1-201ENST00000625148 1513 ntBASIC4.99□□□□□ -1.61
LHX1P48742 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 SNORD113.2-201ENST00000364166 89 ntBASIC4.99□□□□□ -1.61
LHX1P48742 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 CKS1BP6-201ENST00000424932 240 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC073508.1-201ENST00000428866 656 ntBASIC4.99□□□□□ -1.61
LHX1P48742 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 AC074367.1-201ENST00000438685 1125 ntBASIC4.99□□□□□ -1.61
LHX1P48742 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 AL513321.1-201ENST00000441175 761 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 AC006326.1-201ENST00000445465 787 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 AL162591.2-201ENST00000449634 317 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 RN7SL354P-201ENST00000469282 294 ntBASIC4.99□□□□□ -1.61
LHX1P48742 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.99□□□□□ -1.61
LHX1P48742 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 SNORA26.10-201ENST00000516427 141 ntBASIC4.99□□□□□ -1.61
LHX1P48742 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 AL136520.1-202ENST00000555494 763 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC105129.1-201ENST00000560250 297 ntBASIC4.99□□□□□ -1.61
LHX1P48742 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.99□□□□□ -1.61
LHX1P48742 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 AC073091.2-201ENST00000603205 907 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC019193.2-201ENST00000610012 634 ntBASIC4.99□□□□□ -1.61
LHX1P48742 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.99□□□□□ -1.61
LHX1P48742 AP000346.3-201ENST00000622821 210 ntBASIC4.99□□□□□ -1.61
LHX1P48742 AC010435.1-201ENST00000623353 1177 ntBASIC4.99□□□□□ -1.61
LHX1P48742 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.99□□□□□ -1.61
LHX1P48742 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
LHX1P48742 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LHX1P48742 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LHX1P48742 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LHX1P48742 AC007342.7-201ENST00000624610 2337 ntBASIC4.98□□□□□ -1.61
LHX1P48742 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
LHX1P48742 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 DHX9P1-201ENST00000436565 3076 ntBASIC4.98□□□□□ -1.61
LHX1P48742 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.98□□□□□ -1.61
LHX1P48742 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LHX1P48742 AC125257.1-201ENST00000560400 2930 ntBASIC4.98□□□□□ -1.61
LHX1P48742 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LHX1P48742 RNA5SP443-201ENST00000363083 132 ntBASIC4.98□□□□□ -1.61
LHX1P48742 SNORA71.2-201ENST00000364941 134 ntBASIC4.98□□□□□ -1.61
LHX1P48742 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 RPL7P57-201ENST00000423238 740 ntBASIC4.98□□□□□ -1.61
LHX1P48742 HSPE1P16-201ENST00000426640 348 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 NDUFA5P10-201ENST00000432147 357 ntBASIC4.98□□□□□ -1.61
LHX1P48742 FTLP19-201ENST00000433300 394 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AC108463.1-201ENST00000450258 347 ntBASIC4.98□□□□□ -1.61
LHX1P48742 CEACAMP6-201ENST00000452007 574 ntBASIC4.98□□□□□ -1.61
LHX1P48742 SEPT7P3-201ENST00000455017 621 ntBASIC4.98□□□□□ -1.61
LHX1P48742 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 NDUFA12P1-201ENST00000455914 406 ntBASIC4.98□□□□□ -1.61
LHX1P48742 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 RWDD4P1-201ENST00000488019 565 ntBASIC4.98□□□□□ -1.61
LHX1P48742 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms