Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCC3P46736 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRCC3P46736 AP000542.2-201ENST00000623199 6179 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCC3P46736 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.87□□□□□ -1.63
BRCC3P46736 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.87□□□□□ -1.63
BRCC3P46736 PTP4A1P1-201ENST00000420539 515 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 RCC2P2-201ENST00000422174 918 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AL356387.2-201ENST00000422272 243 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AC023141.6-201ENST00000429418 337 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCC3P46736 AL935212.3-201ENST00000450729 284 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 RPL23AP24-201ENST00000458203 385 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCC3P46736 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCC3P46736 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.87□□□□□ -1.63
BRCC3P46736 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCC3P46736 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCC3P46736 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.87□□□□□ -1.63
BRCC3P46736 AL590392.1-201ENST00000604960 446 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AC012557.1-201ENST00000607115 611 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AC090948.1-201ENST00000607464 549 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 AC015914.2-201ENST00000618167 288 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 TMEM30CP-203ENST00000637814 1035 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 OR2L1P-202ENST00000641567 1023 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCC3P46736 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
BRCC3P46736 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCC3P46736 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.87□□□□□ -1.63
BRCC3P46736 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.87□□□□□ -1.63
BRCC3P46736 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
BRCC3P46736 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCC3P46736 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
BRCC3P46736 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRCC3P46736 AL731566.1-201ENST00000620490 1937 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 SNORA70.2-201ENST00000364506 135 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 AL049693.1-201ENST00000402760 611 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.86□□□□□ -1.63
BRCC3P46736 SNRPFP1-201ENST00000414761 252 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 GAPDHP49-201ENST00000421421 961 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC234779.1-201ENST00000425910 285 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 RSL24D1P6-201ENST00000426934 401 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC092017.2-201ENST00000427600 362 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 GSTA7P-201ENST00000438425 448 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 TDGF1P1-201ENST00000445734 527 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 OR11I1P-201ENST00000486033 954 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 RPS27AP16-201ENST00000492222 470 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 RN7SKP122-201ENST00000515923 296 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCC3P46736 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 AL049874.4-201ENST00000557593 255 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 FAM60CP-201ENST00000591086 664 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC005962.2-201ENST00000611427 652 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AC009704.2-201ENST00000618739 483 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AL035461.2-201ENST00000619201 524 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 LINC01808-202ENST00000641680 1116 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.86□□□□□ -1.63
BRCC3P46736 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
BRCC3P46736 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
BRCC3P46736 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCC3P46736 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
BRCC3P46736 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BRCC3P46736 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCC3P46736 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCC3P46736 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCC3P46736 RNU4-23P-201ENST00000362839 140 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 AL392003.1-201ENST00000434394 243 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.85□□□□□ -1.63
BRCC3P46736 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 AC098583.1-201ENST00000480875 255 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCC3P46736 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.85□□□□□ -1.63
BRCC3P46736 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BRCC3P46736 AC117525.1-201ENST00000515228 503 ntBASIC4.85□□□□□ -1.63
BRCC3P46736 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms