Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC009238.2-201ENST00000431026 355 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 CDY14P-201ENST00000431260 1014 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 GSTM5P1-201ENST00000434751 660 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 CLUHP1-201ENST00000435012 1190 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AL450263.2-201ENST00000439400 589 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 CDY12P-201ENST00000440679 1015 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC009263.1-201ENST00000441193 1239 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 CDY13P-201ENST00000445813 1015 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 CDY23P-201ENST00000451661 1014 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AL035090.1-201ENST00000454835 332 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC093166.2-201ENST00000455969 1017 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 GYG1P1-201ENST00000460864 698 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC073073.1-201ENST00000493920 463 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AL035404.1-201ENST00000497982 568 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 SUMO2P5-201ENST00000506790 245 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC147055.3-201ENST00000510547 851 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC008562.1-201ENST00000521763 330 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC021451.1-201ENST00000523498 1129 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC079600.1-201ENST00000550326 297 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.25□□□□□ -1.73
NKX2-1P43699 MIR4509-3-201ENST00000578671 94 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AP000919.1-202ENST00000581139 1264 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 MIR4509-2-201ENST00000583920 94 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC015802.2-201ENST00000589690 189 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-1P43699 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 VN1R87P-201ENST00000596706 487 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC099785.1-201ENST00000605697 437 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 AL121652.1-201ENST00000608851 448 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX2-1P43699 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 MIR4509-1-201ENST00000618224 94 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-1P43699 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-1P43699 AC134882.1-201ENST00000603738 1676 ntBASIC4.25□□□□□ -1.73
NKX2-1P43699 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 RPS3AP25-201ENST00000411660 793 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 RPL24P2-201ENST00000421023 475 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC066692.1-201ENST00000421721 457 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AL133173.1-201ENST00000423458 397 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 MTCO2P23-201ENST00000425216 680 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 RPS26P47-201ENST00000427219 348 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 USP12PY-201ENST00000427677 1064 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NKX2-1P43699 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 ACTR3P2-201ENST00000439585 1257 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 RPS7P5-201ENST00000441482 581 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AL592437.1-201ENST00000443781 492 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AC005297.1-201ENST00000444765 862 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AL031313.1-201ENST00000448435 256 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-1P43699 OR51B8P-201ENST00000449892 769 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-1P43699 LRRC37A14P-201ENST00000452297 462 ntBASIC4.24□□□□□ -1.73
NKX2-1P43699 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms