Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC015813.6-201ENST00000624409 5808 ntBASIC5.21□□□□□ -1.58
MTHFRP42898 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.58
MTHFRP42898 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MTHFRP42898 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
MTHFRP42898 AC090971.4-201ENST00000560291 1800 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
MTHFRP42898 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
MTHFRP42898 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC009501.3-201ENST00000605001 1352 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MTHFRP42898 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 AC011755.1-201ENST00000623763 2049 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.2□□□□□ -1.58
MTHFRP42898 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 RNA5SP223-201ENST00000365174 120 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 RNU6-225P-201ENST00000384613 103 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 SNORA77-201ENST00000408716 125 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC073136.2-201ENST00000417282 849 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 RSL24D1P6-201ENST00000426934 401 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 TCEA1P3-201ENST00000443005 880 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.2□□□□□ -1.58
MTHFRP42898 AL161747.1-201ENST00000480068 358 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC093770.1-201ENST00000511559 571 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC098976.1-201ENST00000513014 541 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC092709.1-201ENST00000521355 1045 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.2□□□□□ -1.58
MTHFRP42898 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.2□□□□□ -1.58
MTHFRP42898 CKS1BP1-201ENST00000555221 240 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.2□□□□□ -1.58
MTHFRP42898 MIR4715-201ENST00000584117 79 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC020910.2-201ENST00000603635 610 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AC093765.1-201ENST00000603758 881 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 RPL21P136-201ENST00000605378 396 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 AL445423.1-201ENST00000609941 536 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 CR589904.2-201ENST00000612533 440 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 MIR6853-201ENST00000619642 74 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.2□□□□□ -1.58
MTHFRP42898 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
MTHFRP42898 AC092079.1-201ENST00000558620 1985 ntBASIC5.2□□□□□ -1.58
MTHFRP42898 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MTHFRP42898 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MTHFRP42898 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
MTHFRP42898 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.19□□□□□ -1.58
MTHFRP42898 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.19□□□□□ -1.58
MTHFRP42898 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MTHFRP42898 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 RN7SKP106-201ENST00000410832 272 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 EIF4A1P3-201ENST00000411521 244 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.19□□□□□ -1.58
MTHFRP42898 RPL17P36-201ENST00000420302 549 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 MTND2P11-201ENST00000423638 648 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 FHP1-201ENST00000442741 703 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AL157827.1-201ENST00000447622 132 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MTHFRP42898 RPL12P20-201ENST00000475538 479 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 RN7SL814P-201ENST00000487715 300 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 RPS12P31-201ENST00000491419 398 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 MTCO1P31-201ENST00000506355 492 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.19□□□□□ -1.58
MTHFRP42898 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.19□□□□□ -1.58
MTHFRP42898 HMGB1P46-201ENST00000520062 610 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.19□□□□□ -1.58
MTHFRP42898 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.19□□□□□ -1.58
MTHFRP42898 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
MTHFRP42898 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.19□□□□□ -1.58
MTHFRP42898 AL110118.1-201ENST00000553543 400 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.19□□□□□ -1.58
MTHFRP42898 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.19□□□□□ -1.58
MTHFRP42898 AL590392.1-201ENST00000604960 446 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AC135803.1-201ENST00000608748 565 ntBASIC5.19□□□□□ -1.58
MTHFRP42898 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms