Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 RPS3AP54-201ENST00000435535 734 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 RPL23AP52-201ENST00000439311 478 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF9P41273 DDX39BP2-208ENST00000453923 258 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 RN7SL810P-201ENST00000493031 276 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AC093840.1-201ENST00000511599 336 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 RN7SKP46-201ENST00000515942 234 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AC027455.1-201ENST00000574104 594 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AL354984.3-201ENST00000604803 325 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AC113403.1-201ENST00000604910 193 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AC114781.5-201ENST00000615297 108 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 AC022960.2-201ENST00000616300 666 ntBASIC4.78□□□□□ -1.64
TNFSF9P41273 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TNFSF9P41273 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
TNFSF9P41273 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFSF9P41273 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
TNFSF9P41273 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 AC245100.2-201ENST00000454544 1679 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TNFSF9P41273 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFSF9P41273 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 AL672167.2-201ENST00000377164 879 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 GAPDHP49-201ENST00000421421 961 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AC011998.1-201ENST00000433403 117 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 PPIAP13-201ENST00000434706 478 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFSF9P41273 AC114495.1-201ENST00000441274 436 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 RPL10P17-201ENST00000453852 316 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 RPL7AP52-201ENST00000458096 790 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AC103987.1-201ENST00000473394 348 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AC083829.1-201ENST00000503756 657 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 ATP1B1P1-201ENST00000509767 915 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFSF9P41273 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.77□□□□□ -1.65
TNFSF9P41273 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.77□□□□□ -1.65
TNFSF9P41273 KPNA2P3-201ENST00000584190 848 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFSF9P41273 AL713998.2-201ENST00000604538 1198 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 Z98200.1-201ENST00000607298 470 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 MLECP1-201ENST00000615893 709 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AP003497.2-201ENST00000624220 967 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 AP000843.1-201ENST00000624880 701 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 MIR6830-201ENST00000636015 70 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TNFSF9P41273 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 AC005261.6-201ENST00000623072 1387 ntBASIC4.77□□□□□ -1.65
TNFSF9P41273 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFSF9P41273 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC125336.1-201ENST00000508893 2827 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
TNFSF9P41273 RNU6-249P-201ENST00000363016 102 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC062016.2-201ENST00000420950 676 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 RPL23AP25-201ENST00000430973 463 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 NFYAP1-201ENST00000431953 972 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 RPL34P6-201ENST00000432390 345 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 TPT1P1-201ENST00000458495 518 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 RPL35AP15-201ENST00000468042 339 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.76□□□□□ -1.65
TNFSF9P41273 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.76□□□□□ -1.65
TNFSF9P41273 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 OR5BC1P-201ENST00000529327 739 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TNFSF9P41273 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms