Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HMGN2P47-201ENST00000559378 272 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC6A4P31645 MIR4700-201ENST00000578311 74 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC6A4P31645 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SLC6A4P31645 AP003392.5-201ENST00000607857 415 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC6A4P31645 AC018445.2-201ENST00000622987 260 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC6A4P31645 CYP4F35P-202ENST00000636121 390 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 AL590763.1-201ENST00000398297 1545 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 AC114774.1-201ENST00000507410 1770 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC6A4P31645 AC006042.3-201ENST00000454684 1469 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 AL355488.2-201ENST00000609909 2850 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 NSRP1P1-201ENST00000444067 1693 ntBASIC5.56□□□□□ -1.52
SLC6A4P31645 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SLC6A4P31645 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC6A4P31645 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SLC6A4P31645 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC6A4P31645 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC079097.1-201ENST00000512187 1399 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC083837.1-201ENST00000565297 2994 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 AL078621.3-201ENST00000623707 2042 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AL355834.1-201ENST00000556602 3965 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 OR55B1P-203ENST00000641518 2602 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC005294.1-201ENST00000355509 281 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RNA5SP443-201ENST00000363083 132 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SNORD116.1-201ENST00000365628 92 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SNORD116-9-201ENST00000384000 95 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SNORD116-3-201ENST00000384287 95 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SNORD116-7-201ENST00000384404 95 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SNORD116-5-201ENST00000384462 95 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RNU1-149P-201ENST00000390870 161 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 MTND4P22-201ENST00000413116 1169 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC007394.1-201ENST00000421941 531 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 CNOT7P1-201ENST00000429006 852 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 YWHAEP5-201ENST00000431545 765 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RPL12P17-201ENST00000432393 498 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC6A4P31645 GAPDHP25-201ENST00000447061 1001 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RN7SL172P-201ENST00000460535 303 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RN7SL515P-201ENST00000463999 297 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC058823.1-201ENST00000485315 474 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RN7SL30P-201ENST00000488416 306 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC072052.1-201ENST00000496556 306 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 HIGD1AP14-201ENST00000507617 282 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC6A4P31645 SCARNA20.4-201ENST00000516969 131 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 RNA5SP373-201ENST00000517271 95 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC6A4P31645 CDC42P3-201ENST00000518493 633 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC127381.1-201ENST00000555979 939 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC090888.1-201ENST00000561335 1141 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC005341.1-201ENST00000571086 708 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 MIR4433B-201ENST00000581329 102 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 AC099676.1-201ENST00000608886 657 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AC004948.1-201ENST00000609858 672 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC6A4P31645 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 AP000676.3-201ENST00000623299 569 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC6A4P31645 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 C4BPAP1-201ENST00000415474 1893 ntBASIC5.55□□□□□ -1.52
SLC6A4P31645 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SLC6A4P31645 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SLC6A4P31645 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC6A4P31645 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC6A4P31645 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms