Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL355852.1-201ENST00000454081 1771 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40LGP29965 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 AC008758.3-201ENST00000507003 1829 ntBASIC4.16□□□□□ -1.74
CD40LGP29965 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40LGP29965 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CD40LGP29965 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CD40LGP29965 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD40LGP29965 PNPT1P2-201ENST00000456768 2050 ntBASIC4.15□□□□□ -1.74
CD40LGP29965 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.15□□□□□ -1.74
CD40LGP29965 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.74
CD40LGP29965 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD40LGP29965 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CD40LGP29965 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 RNA5SP502-201ENST00000362694 119 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 RNA5SP339-201ENST00000390987 122 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.15□□□□□ -1.75
CD40LGP29965 JKAMPP1-201ENST00000413804 919 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 MTND2P11-201ENST00000423638 648 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 RPL21P43-201ENST00000425440 472 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AL138785.1-201ENST00000425821 331 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.15□□□□□ -1.75
CD40LGP29965 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40LGP29965 GSTA7P-201ENST00000438425 448 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AL354714.3-201ENST00000447284 493 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 RAB28P3-201ENST00000448325 597 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40LGP29965 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC010627.1-201ENST00000503819 1294 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40LGP29965 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.15□□□□□ -1.75
CD40LGP29965 RPL10P14-201ENST00000565265 298 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC091178.1-203ENST00000584586 279 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC007620.3-201ENST00000608131 497 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.15□□□□□ -1.75
CD40LGP29965 AC011815.3-201ENST00000624194 473 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 AC004808.2-201ENST00000627965 773 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.15□□□□□ -1.75
CD40LGP29965 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40LGP29965 OR11H5P-202ENST00000641612 1325 ntBASIC4.15□□□□□ -1.75
CD40LGP29965 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
CD40LGP29965 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD40LGP29965 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40LGP29965 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40LGP29965 RN7SKP162-201ENST00000363605 345 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 RN7SKP269-201ENST00000365545 319 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 RNA5SP151-201ENST00000365632 117 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 MT-TP-201ENST00000387461 68 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD40LGP29965 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC000111.2-201ENST00000448200 210 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 CALM1P2-201ENST00000452941 448 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 Z92846.1-201ENST00000456203 268 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 MTND6P6-201ENST00000478031 263 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 RPS21P4-201ENST00000487122 248 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40LGP29965 RN7SKP260-201ENST00000516907 149 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 OR10G5P-201ENST00000532733 358 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD40LGP29965 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 AC069307.1-201ENST00000602820 447 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 PSMA6P4-201ENST00000603247 718 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40LGP29965 AL121612.2-201ENST00000612261 482 ntBASIC4.14□□□□□ -1.75
CD40LGP29965 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40LGP29965 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40LGP29965 AL359715.5-201ENST00000623431 443 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms