Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU6-452P-201ENST00000384406 107 ntBASIC8.21□□□□□ -1.1
PTPREP23469 RPS20P2-201ENST00000402520 389 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AL033519.1-201ENST00000407266 307 ntBASIC8.21□□□□□ -1.1
PTPREP23469 RN7SKP91-201ENST00000410852 288 ntBASIC8.21□□□□□ -1.1
PTPREP23469 MCFD2P1-201ENST00000417812 300 ntBASIC8.21□□□□□ -1.1
PTPREP23469 BOLA3P4-201ENST00000418151 400 ntBASIC8.21□□□□□ -1.1
PTPREP23469 RBMY2QP-201ENST00000429799 1147 ntBASIC8.21□□□□□ -1.1
PTPREP23469 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 RPSAP7-201ENST00000456871 885 ntBASIC8.21□□□□□ -1.1
PTPREP23469 RN7SL160P-201ENST00000468558 284 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 AC008967.1-201ENST00000504843 163 ntBASIC8.21□□□□□ -1.1
PTPREP23469 VN1R104P-201ENST00000505115 1009 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AC091885.1-201ENST00000506658 268 ntBASIC8.21□□□□□ -1.1
PTPREP23469 MINOS1P4-201ENST00000515470 318 ntBASIC8.21□□□□□ -1.1
PTPREP23469 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.21□□□□□ -1.1
PTPREP23469 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.21□□□□□ -1.1
PTPREP23469 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.21□□□□□ -1.1
PTPREP23469 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.21□□□□□ -1.1
PTPREP23469 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.21□□□□□ -1.1
PTPREP23469 AC036176.3-201ENST00000602456 418 ntBASIC8.21□□□□□ -1.1
PTPREP23469 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AC005899.7-201ENST00000618199 588 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AC067931.1-201ENST00000624190 671 ntBASIC8.21□□□□□ -1.1
PTPREP23469 AL162377.2-201ENST00000624532 337 ntBASIC8.21□□□□□ -1.1
PTPREP23469 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.21□□□□□ -1.1
PTPREP23469 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PTPREP23469 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.21□□□□□ -1.1
PTPREP23469 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.21□□□□□ -1.1
PTPREP23469 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PTPREP23469 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.21□□□□□ -1.1
PTPREP23469 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.21□□□□□ -1.1
PTPREP23469 PPBPP2-201ENST00000513150 1362 ntBASIC8.21□□□□□ -1.1
PTPREP23469 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.21□□□□□ -1.1
PTPREP23469 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 LINC02035-201ENST00000610128 5476 ntBASIC8.2□□□□□ -1.1
PTPREP23469 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 AC104581.5-201ENST00000624171 7141 ntBASIC8.2□□□□□ -1.1
PTPREP23469 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 AC006020.1-201ENST00000420179 1854 ntBASIC8.2□□□□□ -1.1
PTPREP23469 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 RNU6-777P-201ENST00000364265 104 ntBASIC8.2□□□□□ -1.1
PTPREP23469 Y_RNA.301-201ENST00000364990 103 ntBASIC8.2□□□□□ -1.1
PTPREP23469 MIR1305-201ENST00000408300 86 ntBASIC8.2□□□□□ -1.1
PTPREP23469 MIR320C1-201ENST00000408566 88 ntBASIC8.2□□□□□ -1.1
PTPREP23469 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 GSTA6P-201ENST00000424144 582 ntBASIC8.2□□□□□ -1.1
PTPREP23469 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PTPREP23469 HSPE1P16-201ENST00000426640 348 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 PCBP2P1-201ENST00000437262 977 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 BX323845.2-201ENST00000458382 234 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 RNU7-63P-201ENST00000459054 62 ntBASIC8.2□□□□□ -1.1
PTPREP23469 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 RN7SKP11-201ENST00000517018 287 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.2□□□□□ -1.1
PTPREP23469 NDUFB9P1-201ENST00000604683 510 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AC019257.2-201ENST00000605539 497 ntBASIC8.2□□□□□ -1.1
PTPREP23469 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.2□□□□□ -1.1
PTPREP23469 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
PTPREP23469 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.2□□□□□ -1.1
PTPREP23469 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PTPREP23469 ERCC6-202ENST00000374127 1782 ntBASIC8.2□□□□□ -1.1
PTPREP23469 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms