Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 MTND4P5-201ENST00000435821 1374 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC023490.2-201ENST00000359859 470 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RNA5SP510-201ENST00000364697 99 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 SNORD116-9-201ENST00000384000 95 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 SNORD116-3-201ENST00000384287 95 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 SNORD116-7-201ENST00000384404 95 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 SNORD116-5-201ENST00000384462 95 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RNA5SP284-201ENST00000384547 118 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RNA5SP487-201ENST00000410186 122 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RPS7P9-201ENST00000414704 586 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 GTF2IP2-201ENST00000424290 697 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC005345.1-201ENST00000431868 217 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC073109.1-201ENST00000445066 978 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RPL34P26-201ENST00000445636 354 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RPL5P13-201ENST00000462840 709 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RPF2P2-201ENST00000504693 896 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 RNU6-1129P-201ENST00000515964 104 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 HMGB1P40-201ENST00000525121 540 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC027026.1-201ENST00000532323 742 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC006518.2-201ENST00000542513 940 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC084824.1-201ENST00000550917 1005 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC015720.2-201ENST00000567709 334 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC009852.2-201ENST00000567898 485 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 NDUFA5P11-201ENST00000567995 343 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC016877.3-201ENST00000606778 504 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AL445423.1-201ENST00000609941 536 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AC118658.2-201ENST00000618697 459 ntBASIC4.8□□□□□ -1.64
TNFRSF1BP20333 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFRSF1BP20333 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 AC006484.1-201ENST00000435086 1884 ntBASIC4.79□□□□□ -1.64
TNFRSF1BP20333 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 AL138820.1-201ENST00000617901 5305 ntBASIC4.79□□□□□ -1.64
TNFRSF1BP20333 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 DNAJC19P6-201ENST00000401853 280 ntBASIC4.79□□□□□ -1.64
TNFRSF1BP20333 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFRSF1BP20333 RAP1BP1-201ENST00000412709 553 ntBASIC4.79□□□□□ -1.64
TNFRSF1BP20333 CDY17P-201ENST00000414121 1282 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms