Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
NFKB1P19838 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.68□□□□□ -1.34
NFKB1P19838 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NFKB1P19838 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC006213.6-201ENST00000623722 4179 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 Y_RNA.58-201ENST00000362807 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNA5SP188-201ENST00000362916 129 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNU6-582P-201ENST00000362989 107 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNU6-492P-201ENST00000363035 104 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNU6-666P-201ENST00000363499 107 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 Y_RNA.154-201ENST00000363624 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 Y_RNA.166-201ENST00000363730 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNY4P34-201ENST00000364779 95 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNY3P1-201ENST00000365085 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNY3-201ENST00000365484 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NFKB1P19838 Y_RNA.431-201ENST00000384086 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 Y_RNA.490-201ENST00000384413 102 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 SNORA51.12-201ENST00000384448 134 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RNU6-809P-201ENST00000384461 107 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 RNA5SP498-201ENST00000411342 120 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 RPS21P8-201ENST00000413365 247 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.68□□□□□ -1.34
NFKB1P19838 SPATA20P1-201ENST00000423089 438 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL353729.1-201ENST00000425044 720 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL451136.1-201ENST00000435399 325 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 ACTR3P2-201ENST00000439585 1257 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RPL31P44-201ENST00000447680 377 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 RPS20P20-201ENST00000460498 340 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC092824.1-201ENST00000483524 576 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 KLRA1P-201ENST00000503499 986 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 MTND6P2-201ENST00000512226 524 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AP003467.2-201ENST00000520175 319 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC138832.1-201ENST00000522871 556 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NFKB1P19838 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 RPL3P13-201ENST00000550415 216 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC023310.2-201ENST00000553844 547 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.68□□□□□ -1.34
NFKB1P19838 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC007151.1-201ENST00000572774 483 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 NRBF2P1-201ENST00000587407 859 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC067852.5-201ENST00000589299 310 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.68□□□□□ -1.34
NFKB1P19838 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.68□□□□□ -1.34
NFKB1P19838 AC010205.1-201ENST00000616668 449 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 MRPL57P1-201ENST00000621486 265 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 AC091905.1-201ENST00000624400 311 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 AL596275.2-208ENST00000641192 594 ntBASIC6.68□□□□□ -1.34
NFKB1P19838 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NFKB1P19838 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.68□□□□□ -1.34
NFKB1P19838 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms