Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.65□□□□□ -1.66
XRCC1P18887 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
XRCC1P18887 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
XRCC1P18887 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.65□□□□□ -1.66
XRCC1P18887 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
XRCC1P18887 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.66
XRCC1P18887 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.65□□□□□ -1.66
XRCC1P18887 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
XRCC1P18887 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
XRCC1P18887 Z95327.2-201ENST00000414579 1873 ntBASIC4.65□□□□□ -1.66
XRCC1P18887 AC139713.2-215ENST00000641428 5037 ntBASIC4.65□□□□□ -1.66
XRCC1P18887 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
XRCC1P18887 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
XRCC1P18887 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
XRCC1P18887 RNU6-618P-201ENST00000363518 112 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 RN7SKP224-201ENST00000364140 325 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 AL607077.1-201ENST00000401718 499 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.65□□□□□ -1.67
XRCC1P18887 DHFRP5-201ENST00000406944 564 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 RNA5SP146-201ENST00000410743 123 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 AC092570.3-201ENST00000420113 693 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 NPM1P26-201ENST00000426339 738 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.65□□□□□ -1.67
XRCC1P18887 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.65□□□□□ -1.67
XRCC1P18887 H2AFZP6-201ENST00000444403 394 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.65□□□□□ -1.67
XRCC1P18887 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.65□□□□□ -1.67
XRCC1P18887 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.65□□□□□ -1.67
XRCC1P18887 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 NIP7P2-201ENST00000485801 544 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.65□□□□□ -1.67
XRCC1P18887 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
XRCC1P18887 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.65□□□□□ -1.67
XRCC1P18887 AC018552.1-201ENST00000562099 811 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
XRCC1P18887 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.65□□□□□ -1.67
XRCC1P18887 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.65□□□□□ -1.67
XRCC1P18887 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.65□□□□□ -1.67
XRCC1P18887 AC016911.1-201ENST00000613297 452 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 AC015722.2-201ENST00000622210 551 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 AC004232.3-201ENST00000622977 525 ntBASIC4.65□□□□□ -1.67
XRCC1P18887 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
XRCC1P18887 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.67
XRCC1P18887 AL442639.1-201ENST00000625030 1899 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.64□□□□□ -1.67
XRCC1P18887 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
XRCC1P18887 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
XRCC1P18887 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
XRCC1P18887 RNU1-20P-201ENST00000363314 162 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 RNU6-398P-201ENST00000384143 109 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 MT-RNR1-201ENST00000389680 954 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
XRCC1P18887 RNA5SP372-201ENST00000390836 115 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 SNORA68.2-201ENST00000391263 128 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC119751.6-201ENST00000416712 186 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC004448.2-201ENST00000422360 586 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC007064.3-201ENST00000422608 359 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
XRCC1P18887 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 RN7SL738P-201ENST00000470264 297 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC008897.1-201ENST00000494006 347 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
XRCC1P18887 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.64□□□□□ -1.67
XRCC1P18887 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC091868.1-201ENST00000508746 304 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
XRCC1P18887 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 AL110118.1-201ENST00000553543 400 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 ATP5J2P6-201ENST00000565203 266 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.64□□□□□ -1.67
XRCC1P18887 COX6CP4-201ENST00000605798 228 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AL133406.3-201ENST00000606817 541 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC007620.3-201ENST00000608131 497 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 MIR7703-201ENST00000620784 77 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AC012414.7-202ENST00000622705 1090 ntBASIC4.64□□□□□ -1.67
XRCC1P18887 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.64□□□□□ -1.67
XRCC1P18887 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.64□□□□□ -1.67
XRCC1P18887 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
XRCC1P18887 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.64□□□□□ -1.67
XRCC1P18887 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
XRCC1P18887 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.64□□□□□ -1.67
XRCC1P18887 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
XRCC1P18887 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms