Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RN7SKP103-201ENST00000363848 320 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTLA4P16410 SNORA68.2-201ENST00000391263 128 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 VN1R8P-201ENST00000407739 893 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 RN7SKP216-201ENST00000411050 312 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.92□□□□□ -1.78
CTLA4P16410 SNRPFP1-201ENST00000414761 252 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 USP9YP9-201ENST00000429406 715 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 AP001804.2-201ENST00000533932 910 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.92□□□□□ -1.78
CTLA4P16410 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.92□□□□□ -1.78
CTLA4P16410 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC005034.4-201ENST00000603612 899 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 AL353600.1-201ENST00000608148 251 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 AC100847.1-201ENST00000611316 481 ntBASIC3.92□□□□□ -1.78
CTLA4P16410 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
CTLA4P16410 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CTLA4P16410 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTLA4P16410 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTLA4P16410 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CTLA4P16410 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTLA4P16410 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTLA4P16410 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
CTLA4P16410 GLULP6-201ENST00000399502 913 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 MIR1911-201ENST00000410783 80 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.91□□□□□ -1.78
CTLA4P16410 UQCRBP1-201ENST00000421129 336 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 RPL7AP25-201ENST00000423357 805 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AC073335.1-201ENST00000427776 363 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 BRWD1P3-201ENST00000428816 390 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC006466.1-201ENST00000438721 289 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AL450263.2-201ENST00000439400 589 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AL162591.2-201ENST00000449634 317 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.91□□□□□ -1.78
CTLA4P16410 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTLA4P16410 AP000827.1-201ENST00000527814 258 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.91□□□□□ -1.78
CTLA4P16410 AL121839.1-201ENST00000556233 1185 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC069061.3-201ENST00000582254 823 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.91□□□□□ -1.78
CTLA4P16410 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.91□□□□□ -1.78
CTLA4P16410 MIR7154-201ENST00000620673 73 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AC083843.3-201ENST00000623679 2186 ntBASIC3.91□□□□□ -1.78
CTLA4P16410 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.91□□□□□ -1.78
CTLA4P16410 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
CTLA4P16410 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.91□□□□□ -1.78
CTLA4P16410 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTLA4P16410 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.9□□□□□ -1.78
CTLA4P16410 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CTLA4P16410 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CTLA4P16410 OR51C1P-202ENST00000641159 1444 ntBASIC3.9□□□□□ -1.78
CTLA4P16410 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CTLA4P16410 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.9□□□□□ -1.79
CTLA4P16410 RNU1-130P-201ENST00000363930 160 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTLA4P16410 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CTLA4P16410 AL133270.1-201ENST00000402635 279 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.9□□□□□ -1.79
CTLA4P16410 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.9□□□□□ -1.79
CTLA4P16410 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.9□□□□□ -1.79
CTLA4P16410 MAPRE1P3-201ENST00000435438 796 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 AC114495.1-201ENST00000441274 436 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.9□□□□□ -1.79
CTLA4P16410 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.9□□□□□ -1.79
CTLA4P16410 MTND4LP12-201ENST00000448237 295 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 AP000942.1-201ENST00000463969 747 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 RPS26P28-201ENST00000470806 348 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 TRBV8-1-201ENST00000481590 279 ntBASIC3.9□□□□□ -1.79
CTLA4P16410 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.9□□□□□ -1.79
CTLA4P16410 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.9□□□□□ -1.79
CTLA4P16410 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.9□□□□□ -1.79
CTLA4P16410 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms