Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 KCTD9P1-201ENST00000430462 1167 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB1P09429 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC019185.1-201ENST00000442718 389 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB1P09429 AL672138.1-201ENST00000450604 1015 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 DNAJB5P1-201ENST00000454004 806 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 SNORD108-201ENST00000459332 71 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC093801.2-201ENST00000503966 1050 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC011352.3-201ENST00000505162 593 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC074087.1-201ENST00000512059 724 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 MTND6P2-201ENST00000512226 524 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 SCARNA20.4-201ENST00000516969 131 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC022882.1-201ENST00000532142 501 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB1P09429 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AGGF1P8-201ENST00000562979 1000 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC022069.1-201ENST00000582910 658 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC026979.4-201ENST00000606555 645 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGB1P09429 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB1P09429 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGB1P09429 AC132068.1-201ENST00000623805 459 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMGB1P09429 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB1P09429 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGB1P09429 MTND5P28-201ENST00000438005 1594 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 DCAF13P1-201ENST00000495256 1330 ntBASIC6.47□□□□□ -1.37
HMGB1P09429 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGB1P09429 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.46□□□□□ -1.37
HMGB1P09429 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HMGB1P09429 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGB1P09429 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HMGB1P09429 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 MAPK10-286ENST00000641208 8747 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 RNU6-1243P-201ENST00000364028 107 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 RNU6-549P-201ENST00000384433 107 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 MIR16-1-201ENST00000385271 89 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 ENSAP1-201ENST00000392855 326 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 RN7SKP97-201ENST00000410966 333 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 Z93019.1-201ENST00000416450 973 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 AL138899.2-201ENST00000439139 499 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC016772.1-201ENST00000444170 1261 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 HMGN1P36-201ENST00000446623 298 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 RPL31P15-201ENST00000449770 338 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 PPIAP3-201ENST00000450588 505 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 OR52E3P-201ENST00000452083 936 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 AC087879.1-201ENST00000474343 374 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 AP000926.1-201ENST00000479573 241 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC091860.1-201ENST00000505723 432 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC109464.1-201ENST00000511091 819 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 PTGES3P3-201ENST00000511479 482 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGB1P09429 OR8L1P-201ENST00000534005 955 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC015720.2-201ENST00000567709 334 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGB1P09429 AP005403.1-201ENST00000579720 229 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AL162431.4-201ENST00000604674 411 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 AC127024.6-201ENST00000621598 424 ntBASIC6.46□□□□□ -1.38
HMGB1P09429 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HMGB1P09429 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB1P09429 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB1P09429 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB1P09429 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HMGB1P09429 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB1P09429 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB1P09429 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
HMGB1P09429 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB1P09429 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB1P09429 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGB1P09429 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms