Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PHBP17-201ENST00000528576 541 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CXCL1P09341 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 FKBP1AP1-201ENST00000594588 318 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 AC110741.2-201ENST00000605278 268 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL1P09341 AC007497.1-201ENST00000610421 561 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.44□□□□□ -1.86
CXCL1P09341 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL1P09341 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 NXPH1-205ENST00000602349 1953 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CXCL1P09341 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL1P09341 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 SNORA74A-201ENST00000364089 198 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 OR3A2-201ENST00000408891 1076 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 MTND4LP21-201ENST00000415303 295 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 RPL7P11-201ENST00000437586 658 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 TPTE2P3-201ENST00000441562 1189 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC022431.1-201ENST00000450941 438 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 HIGD1AP8-201ENST00000453927 274 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 RPS5P7-201ENST00000456664 608 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC023141.9-201ENST00000458734 412 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 RPL23AP56-201ENST00000460778 453 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC069499.1-201ENST00000489433 509 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC024558.1-201ENST00000505008 528 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL1P09341 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC092490.3-201ENST00000545370 572 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 SNORD39.2-201ENST00000579995 76 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC022726.1-201ENST00000587475 207 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC008521.2-201ENST00000591021 259 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 BNIP3P32-201ENST00000600015 554 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL1P09341 MEMO1P5-201ENST00000604810 406 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AL160290.3-201ENST00000604869 165 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AL391358.1-201ENST00000605342 190 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 OR7A19P-201ENST00000608051 733 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 AC008115.4-201ENST00000619780 775 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.43□□□□□ -1.86
CXCL1P09341 AC010809.3-201ENST00000621310 641 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 AC008785.1-201ENST00000624475 456 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 CASC19-222ENST00000641321 1173 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 OR8A1-204ENST00000642111 1145 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CXCL1P09341 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 AL133412.1-201ENST00000380194 2992 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CXCL1P09341 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 CUL4AP1-201ENST00000514750 1863 ntBASIC3.43□□□□□ -1.86
CXCL1P09341 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL1P09341 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL1P09341 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL1P09341 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL1P09341 MAPK10-263ENST00000641052 4307 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 PNPT1P2-201ENST00000456768 2050 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL1P09341 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL1P09341 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CXCL1P09341 SNORA17A-201ENST00000391185 133 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 U3.30-201ENST00000391308 210 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 NCSTNP1-201ENST00000406229 144 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 SNORA3C-201ENST00000408792 125 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 RHEBP3-201ENST00000411920 351 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL1P09341 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL1P09341 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL1P09341 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 H2AFZP5-201ENST00000446960 382 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 ABCF2P2-201ENST00000450549 296 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms