Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL121873.1-201ENST00000616013 524 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 SAMMSON-213ENST00000641336 1521 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 HCFC2P1-201ENST00000392864 1592 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 U3.22-201ENST00000391120 215 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 RPL21P108-201ENST00000413857 481 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AL732292.1-201ENST00000426692 226 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 SKP1P3-201ENST00000429280 487 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC011998.1-201ENST00000433403 117 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 RPL23AP24-201ENST00000458203 385 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC135999.1-201ENST00000478962 479 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 TCP11X3P-202ENST00000514289 1254 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC010476.1-201ENST00000519111 851 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 OR10D4P-201ENST00000525892 951 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 MIR4700-201ENST00000578311 74 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AL451049.1-201ENST00000608672 497 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 BX323046.1-201ENST00000610145 535 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AL021997.2-201ENST00000615674 271 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQB2P05538 AP001273.1-201ENST00000624493 3152 ntBASIC4.41□□□□□ -1.7
HLA-DQB2P05538 SCN1A-220ENST00000641603 12506 ntBASIC4.4□□□□□ -1.7
HLA-DQB2P05538 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.7
HLA-DQB2P05538 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 AC006971.1-201ENST00000407916 4486 ntBASIC4.4□□□□□ -1.7
HLA-DQB2P05538 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQB2P05538 RNU4-39P-201ENST00000362455 127 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 SNORD66.1-201ENST00000391230 76 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 VN1R8P-201ENST00000407739 893 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 PDSS1P1-201ENST00000422953 1114 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC068287.1-201ENST00000430283 295 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 FHP1-201ENST00000442741 703 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 ABCF2P2-201ENST00000450549 296 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 CYCSP42-201ENST00000450823 238 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 RN7SL810P-201ENST00000493031 276 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 TRAV8-5-201ENST00000537369 341 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC005191.1-201ENST00000603950 358 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AL035461.2-201ENST00000619201 524 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC140479.6-201ENST00000633535 357 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 MTCO1P46-201ENST00000451639 1491 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DQB2P05538 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
HLA-DQB2P05538 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RNA5SP175-201ENST00000364275 119 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RANP7-201ENST00000418085 644 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms