Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR4271-201ENST00000582451 67 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFAP04085 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC068726.1-201ENST00000610993 341 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 PART1_1.1-201ENST00000611761 217 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 AC078899.5-201ENST00000612475 178 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDGFAP04085 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFAP04085 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFAP04085 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.47□□□□□ -1.37
PDGFAP04085 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFAP04085 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.46□□□□□ -1.37
PDGFAP04085 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.37
PDGFAP04085 AP002800.1-201ENST00000624982 2225 ntBASIC6.46□□□□□ -1.37
PDGFAP04085 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
PDGFAP04085 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.46□□□□□ -1.37
PDGFAP04085 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFAP04085 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.46□□□□□ -1.37
PDGFAP04085 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.46□□□□□ -1.37
PDGFAP04085 AC010894.1-201ENST00000313760 361 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 MRPL42P2-201ENST00000403169 426 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.46□□□□□ -1.38
PDGFAP04085 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 TUBB4BP6-201ENST00000437576 479 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 RPL23P10-201ENST00000468780 412 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 RN7SL170P-201ENST00000487098 295 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 RNU6-445P-201ENST00000516949 107 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 IGLC4-201ENST00000517690 248 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 RPL10P18-201ENST00000519384 309 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFAP04085 HIF1AP1-201ENST00000553642 175 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 AP000766.1-201ENST00000561746 4140 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 ANP32BP1-202ENST00000568553 737 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 MTCO3P13-201ENST00000577757 781 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 AL136097.3-201ENST00000611097 505 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 MIR6806-201ENST00000622141 64 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.46□□□□□ -1.38
PDGFAP04085 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDGFAP04085 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
PDGFAP04085 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFAP04085 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFAP04085 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFAP04085 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFAP04085 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
PDGFAP04085 AC010928.1-201ENST00000592477 1447 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 RPL23AP57-201ENST00000332361 466 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFAP04085 Y_RNA.86-201ENST00000363020 111 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 RNU6-984P-201ENST00000363236 109 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 Y_RNA.460-201ENST00000384255 102 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 FAT1P1-201ENST00000406588 507 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 GAPDHP42-201ENST00000406848 981 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 RNU6-908P-201ENST00000410160 94 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 RNU2-22P-201ENST00000411266 212 ntBASIC6.45□□□□□ -1.38
PDGFAP04085 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFAP04085 RPL7P54-201ENST00000438336 674 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms