Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.46□□□□□ -1.7
MT-ND1P03886 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.45□□□□□ -1.7
MT-ND1P03886 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
MT-ND1P03886 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC017104.4-201ENST00000636283 1592 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 RNA5SP435-201ENST00000364044 108 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 UBE2V1P15-201ENST00000407776 448 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 RNA5SP345-201ENST00000410646 108 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 RNU2-72P-201ENST00000411175 163 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 EIF4A1P3-201ENST00000411521 244 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AP000534.2-201ENST00000412729 568 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC009237.10-201ENST00000414112 510 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.45□□□□□ -1.7
MT-ND1P03886 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.45□□□□□ -1.7
MT-ND1P03886 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AL451139.1-201ENST00000434718 346 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 RPS20P1-201ENST00000434853 354 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC245517.2-201ENST00000442890 346 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC023512.1-201ENST00000444513 499 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AL163193.1-201ENST00000444895 788 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 MTND5P8-201ENST00000449817 1083 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 RN7SL222P-201ENST00000476452 299 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC116562.1-201ENST00000485355 781 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 RN7SL97P-201ENST00000486780 299 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 RNU6-1308P-201ENST00000516817 103 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.45□□□□□ -1.7
MT-ND1P03886 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 OR11J2P-201ENST00000555298 907 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC007225.2-201ENST00000562529 256 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC022884.3-201ENST00000579571 248 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 RN7SL176P-201ENST00000580352 264 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC040174.2-201ENST00000602701 465 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC005014.3-201ENST00000605985 190 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AC091979.2-201ENST00000607514 214 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 MIR6768-201ENST00000610734 72 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AL627230.1-201ENST00000613077 211 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AL591926.8-201ENST00000616876 211 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 HSPD1P14-201ENST00000432666 1618 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 CASC19-204ENST00000641001 2055 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 AP001002.1-201ENST00000625148 1513 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MT-ND1P03886 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 AL136164.3-201ENST00000624429 3978 ntBASIC4.45□□□□□ -1.7
MT-ND1P03886 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MT-ND1P03886 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 BRAFP1-201ENST00000445336 2703 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 SNORA27.3-201ENST00000364937 134 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.44□□□□□ -1.7
MT-ND1P03886 BMS1P13-201ENST00000417301 885 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 CYCSP10-201ENST00000417973 294 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 VN1R37P-201ENST00000419096 748 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.44□□□□□ -1.7
MT-ND1P03886 AC004448.2-201ENST00000422360 586 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 RPS17P8-201ENST00000434525 335 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.44□□□□□ -1.7
MT-ND1P03886 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.44□□□□□ -1.7
MT-ND1P03886 CNOT7P2-201ENST00000441051 832 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AL137845.2-201ENST00000444292 988 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 ATP5G1P3-201ENST00000463301 410 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 PPIAP21-201ENST00000464473 501 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 UBA52P3-201ENST00000491303 382 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 RNU6-347P-201ENST00000516658 105 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.44□□□□□ -1.7
MT-ND1P03886 HIGD1AP18-201ENST00000520730 278 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 AC022832.1-201ENST00000530718 645 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms