Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NKX2-2O95096 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AP000534.2-201ENST00000412729 568 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AL139148.1-201ENST00000427122 680 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 NANOGP4-201ENST00000427230 913 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 MTCYBP32-201ENST00000427945 1084 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC073069.1-201ENST00000428657 441 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.74□□□□□ -1.65
NKX2-2O95096 RPL7AP61-201ENST00000443410 636 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AL592437.1-201ENST00000443781 492 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC099063.2-201ENST00000446360 662 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 FAR2P1-206ENST00000449736 709 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC245028.2-201ENST00000458673 253 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 RNU7-140P-201ENST00000459546 60 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 RN7SL443P-201ENST00000464331 290 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC072052.1-201ENST00000496556 306 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 IGKV2-36-201ENST00000519999 223 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.74□□□□□ -1.65
NKX2-2O95096 MTND2P32-201ENST00000521584 1038 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 OR7E13P-201ENST00000526052 910 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 BNIP3P4-201ENST00000604946 565 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC005377.1-201ENST00000605126 456 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 Z95327.3-201ENST00000610385 572 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC099494.2-201ENST00000623371 978 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC104985.3-201ENST00000623479 597 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AL121594.5-201ENST00000631724 573 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NKX2-2O95096 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 MAPK10-328ENST00000641553 4009 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NKX2-2O95096 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC104446.1-201ENST00000613728 1321 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NKX2-2O95096 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 RNU6-353P-201ENST00000364266 108 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NKX2-2O95096 RN7SKP126-201ENST00000411143 300 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 PTGES3P1-201ENST00000439531 483 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 YWHAQP9-201ENST00000445891 512 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AL929288.2-201ENST00000446368 407 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC004980.3-201ENST00000447046 365 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 MRPL35P2-201ENST00000448009 511 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AL031313.1-201ENST00000448435 256 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 TPMTP4-201ENST00000450749 678 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 DNAJC19P8-201ENST00000452887 259 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC002553.2-201ENST00000453217 340 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 RPL7P32-201ENST00000457119 744 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC091180.1-201ENST00000462104 372 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC079841.1-201ENST00000481228 950 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC010306.1-201ENST00000523223 1117 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC104417.1-201ENST00000523974 751 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC124293.1-201ENST00000530034 493 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms