Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 NF1P3-201ENST00000457709 450 ntBASIC7.78□□□□□ -1.16
RNF40O75150 PSMC1P13-201ENST00000458195 985 ntBASIC7.78□□□□□ -1.16
RNF40O75150 SNORA35.1-201ENST00000458908 128 ntBASIC7.78□□□□□ -1.16
RNF40O75150 RNU7-63P-201ENST00000459054 62 ntBASIC7.78□□□□□ -1.16
RNF40O75150 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 HMGB3P17-201ENST00000504195 649 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF40O75150 FAM206BP-201ENST00000510179 541 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC022616.6-201ENST00000520479 119 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 OR7E96P-201ENST00000530816 976 ntBASIC7.78□□□□□ -1.16
RNF40O75150 OR4C1P-201ENST00000530880 937 ntBASIC7.78□□□□□ -1.16
RNF40O75150 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 SAA3P-201ENST00000533267 365 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC068631.3-201ENST00000538831 225 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 UBE2CP4-201ENST00000561405 535 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 IGLJCOR18-201ENST00000584002 424 ntBASIC7.78□□□□□ -1.16
RNF40O75150 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 AC007255.2-201ENST00000604053 631 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AP001554.1-201ENST00000604533 376 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AL451085.1-201ENST00000604546 690 ntBASIC7.78□□□□□ -1.16
RNF40O75150 RNU6-89P-201ENST00000606519 100 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC004908.1-201ENST00000606572 541 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC012510.1-201ENST00000607946 759 ntBASIC7.78□□□□□ -1.16
RNF40O75150 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 AC244100.4-201ENST00000617747 388 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AL354950.2-201ENST00000617939 290 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC005899.7-201ENST00000618199 588 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC093909.6-201ENST00000624757 775 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC026634.1-201ENST00000634369 198 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AL596275.2-208ENST00000641192 594 ntBASIC7.78□□□□□ -1.16
RNF40O75150 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF40O75150 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 AC007485.2-201ENST00000623493 1667 ntBASIC7.78□□□□□ -1.16
RNF40O75150 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF40O75150 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.78□□□□□ -1.16
RNF40O75150 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 AC007406.5-201ENST00000570140 3170 ntBASIC7.78□□□□□ -1.16
RNF40O75150 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RNF40O75150 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RNF40O75150 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
RNF40O75150 OR2AH1P-202ENST00000641232 2744 ntBASIC7.78□□□□□ -1.16
RNF40O75150 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 ZNF807-201ENST00000328088 1707 ntBASIC7.78□□□□□ -1.16
RNF40O75150 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.16
RNF40O75150 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF40O75150 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
RNF40O75150 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 AC007993.1-201ENST00000621298 2430 ntBASIC7.77□□□□□ -1.17
RNF40O75150 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF40O75150 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 RNA5SP260-201ENST00000363849 111 ntBASIC7.77□□□□□ -1.17
RNF40O75150 RNU4-1-201ENST00000363925 141 ntBASIC7.77□□□□□ -1.17
RNF40O75150 AL591416.1-201ENST00000404015 867 ntBASIC7.77□□□□□ -1.17
RNF40O75150 SNORA11D-201ENST00000408548 128 ntBASIC7.77□□□□□ -1.17
RNF40O75150 SNORA11E-201ENST00000408778 128 ntBASIC7.77□□□□□ -1.17
RNF40O75150 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF40O75150 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 AL160004.2-201ENST00000432935 350 ntBASIC7.77□□□□□ -1.17
RNF40O75150 ERLEC1P1-201ENST00000433806 578 ntBASIC7.77□□□□□ -1.17
RNF40O75150 AL590682.1-201ENST00000437248 344 ntBASIC7.77□□□□□ -1.17
RNF40O75150 RPS7P4-201ENST00000444127 582 ntBASIC7.77□□□□□ -1.17
RNF40O75150 AC073415.1-201ENST00000449240 153 ntBASIC7.77□□□□□ -1.17
RNF40O75150 SLAMF6P1-201ENST00000451067 602 ntBASIC7.77□□□□□ -1.17
RNF40O75150 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 RN7SL325P-201ENST00000460434 283 ntBASIC7.77□□□□□ -1.17
RNF40O75150 RN7SL834P-201ENST00000461450 286 ntBASIC7.77□□□□□ -1.17
RNF40O75150 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 RN7SKP233-201ENST00000517005 110 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms