Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 MIR708-201ENST00000390708 88 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 RNA5SP332-201ENST00000391063 115 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 ZNF603P-201ENST00000405613 487 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 RPL23AP48-201ENST00000406913 488 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 BX510359.2-201ENST00000417920 305 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC004074.1-201ENST00000421810 1063 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 HMGB1P16-201ENST00000447155 540 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 AL133477.1-201ENST00000457472 514 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC026348.1-201ENST00000462549 1053 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 RPL7P22-201ENST00000466005 733 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 RPL23AP71-201ENST00000470966 469 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.5□□□□□ -1.85
SSSCA1O60232 AC093270.2-201ENST00000486157 792 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 UBA52P3-201ENST00000491303 382 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.5□□□□□ -1.85
SSSCA1O60232 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 AC016180.1-201ENST00000567945 403 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 AL512782.1-201ENST00000603093 364 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC073091.2-201ENST00000603205 907 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AL121612.2-201ENST00000612261 482 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 MIR6853-201ENST00000619642 74 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 AL356121.2-201ENST00000624715 780 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SSSCA1O60232 FP325313.1-201ENST00000638228 703 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 OR4G1P-202ENST00000641173 1788 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.5□□□□□ -1.85
SSSCA1O60232 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 AC012020.1-201ENST00000624541 1728 ntBASIC3.5□□□□□ -1.85
SSSCA1O60232 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.5□□□□□ -1.85
SSSCA1O60232 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.5□□□□□ -1.85
SSSCA1O60232 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSSCA1O60232 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 LINC02471-203ENST00000641941 4752 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC010132.2-201ENST00000295493 1043 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AL590240.1-201ENST00000334118 313 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 RNA5SP123-201ENST00000363244 119 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 U8.4-201ENST00000363626 134 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 RNA5SP513-201ENST00000364648 118 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.49□□□□□ -1.85
SSSCA1O60232 RNU6-171P-201ENST00000384354 107 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 MIR1282-201ENST00000408865 101 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 RN7SKP273-201ENST00000411392 314 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 SNRPFP1-201ENST00000414761 252 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.49□□□□□ -1.85
SSSCA1O60232 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.49□□□□□ -1.85
SSSCA1O60232 TRGV5P-201ENST00000419915 354 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.49□□□□□ -1.85
SSSCA1O60232 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 AL590609.2-201ENST00000421430 368 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 MTND2P11-201ENST00000423638 648 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 RBMY2QP-201ENST00000429799 1147 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AL357520.1-201ENST00000441557 453 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSSCA1O60232 RPL35AP15-201ENST00000468042 339 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 CCDC75P1-201ENST00000469247 791 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 RPL23AP2-201ENST00000471227 466 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 ATP1B1P1-201ENST00000509767 915 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 ATP5LP3-201ENST00000514223 304 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC021006.3-201ENST00000530771 192 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC008033.2-201ENST00000542626 177 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.49□□□□□ -1.85
SSSCA1O60232 AC027176.2-201ENST00000559166 746 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 SULT1C2P2-201ENST00000562517 294 ntBASIC3.49□□□□□ -1.85
SSSCA1O60232 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms