Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 AC145350.1-201ENST00000567426 208 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.1□□□□□ -1.59
SMAD6O43541 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC069304.3-201ENST00000603938 1084 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AL049844.2-201ENST00000604280 628 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 Z94722.1-201ENST00000604328 474 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC091932.2-201ENST00000623014 291 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 PCAT14-202ENST00000627127 3935 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMAD6O43541 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.09□□□□□ -1.59
SMAD6O43541 AC004817.4-201ENST00000602396 3625 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
SMAD6O43541 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
SMAD6O43541 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SMAD6O43541 Y_RNA.62-201ENST00000362840 99 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 ATP5HP3-201ENST00000396994 486 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 RAB9AP4-201ENST00000415230 609 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC096644.3-201ENST00000416788 338 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 COX6CP13-201ENST00000428703 226 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 TXNL1P1-201ENST00000429528 554 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 MTND2P5-201ENST00000432656 1006 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AL035246.1-201ENST00000433554 1255 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.09□□□□□ -1.59
SMAD6O43541 RPS29P9-201ENST00000440360 171 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 EXOSC3P1-201ENST00000448649 500 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 RSL24D1P3-201ENST00000449255 495 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.09□□□□□ -1.59
SMAD6O43541 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.09□□□□□ -1.59
SMAD6O43541 PRPF38AP1-201ENST00000451976 933 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.09□□□□□ -1.59
SMAD6O43541 SNORD11.1-201ENST00000459482 85 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 RPS3AP41-201ENST00000462701 778 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 RN7SL809P-201ENST00000482040 297 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AP000563.1-201ENST00000490865 758 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 RN7SL591P-201ENST00000496150 292 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 ENPP7P11-201ENST00000505915 627 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.09□□□□□ -1.59
SMAD6O43541 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.09□□□□□ -1.59
SMAD6O43541 AP006245.2-201ENST00000522004 300 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 OR7E10P-201ENST00000526420 991 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SMAD6O43541 UBTFL9-201ENST00000534504 1148 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 AL132857.1-201ENST00000555180 708 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.09□□□□□ -1.59
SMAD6O43541 EIF1P5-201ENST00000585002 234 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 ZNF92P3-201ENST00000596594 954 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.09□□□□□ -1.59
SMAD6O43541 AC008536.1-201ENST00000602872 669 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 AC245008.1-201ENST00000608123 476 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AC004241.3-201ENST00000611728 517 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 AL512506.2-201ENST00000624472 458 ntBASIC5.09□□□□□ -1.59
SMAD6O43541 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SMAD6O43541 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.09□□□□□ -1.59
SMAD6O43541 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SMAD6O43541 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SMAD6O43541 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SMAD6O43541 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SMAD6O43541 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SMAD6O43541 MAPK10-328ENST00000641553 4009 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 AC063976.2-201ENST00000425667 3556 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 AL450326.2-201ENST00000421913 1962 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 RNU5E-10P-201ENST00000363506 118 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AMZ2P2-201ENST00000406819 1057 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 RN7SKP16-201ENST00000410180 299 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms