Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 GTF2IP23-201ENST00000423746 351 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC113412.1-201ENST00000425840 504 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 PPIAP13-201ENST00000434706 478 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 SETP8-201ENST00000435341 628 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 GTF2IP7-202ENST00000436677 309 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 RPS10P18-201ENST00000442662 495 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC005297.1-201ENST00000444765 862 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 GAPDHP14-201ENST00000450472 937 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC079776.3-201ENST00000450665 370 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 TPMTP4-201ENST00000450749 678 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC243772.1-201ENST00000451620 410 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AL354710.1-201ENST00000453641 246 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 CBX1P2-201ENST00000453841 458 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC117394.1-201ENST00000477323 567 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC012123.2-201ENST00000485809 248 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 RPS27AP18-201ENST00000515536 459 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 RNA5SP271-201ENST00000516700 88 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 SNORA43.3-201ENST00000517240 103 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC092709.1-201ENST00000521355 1045 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC008562.1-201ENST00000521763 330 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC007834.2-201ENST00000536310 343 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 OSBPL9P5-201ENST00000542581 171 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 AGGF1P6-201ENST00000569213 976 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 RN7SL290P-201ENST00000578661 300 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AL157770.1-201ENST00000623049 439 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 CDRT1-208ENST00000630868 794 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 MIR1322-201ENST00000638013 71 ntBASIC5.42□□□□□ -1.54
PHGDHO43175 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.42□□□□□ -1.54
PHGDHO43175 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
PHGDHO43175 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PHGDHO43175 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHGDHO43175 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.42□□□□□ -1.54
PHGDHO43175 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PHGDHO43175 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 BX005019.1-201ENST00000561881 1810 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 HMGB1P5-201ENST00000255320 642 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PHGDHO43175 RNA5SP241-201ENST00000391326 114 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 RPS3AP2-201ENST00000407190 754 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 RN7SKP240-201ENST00000410583 375 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 OR51A3P-201ENST00000413596 924 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC234782.4-201ENST00000417646 1048 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AL662874.1-201ENST00000426065 230 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 USP9YP11-201ENST00000427537 717 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AL008629.1-201ENST00000438615 184 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PHGDHO43175 RNU6-1218P-201ENST00000458990 108 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC010486.2-201ENST00000505572 483 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC093755.1-201ENST00000512950 1023 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC118465.1-201ENST00000513820 1271 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms