Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RN7SL810P-201ENST00000493031 276 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 AC025857.1-201ENST00000525252 377 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH4O15457 AC068993.1-201ENST00000546724 589 ntBASIC4.99□□□□□ -1.61
MSH4O15457 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 RPL7P50-201ENST00000600588 727 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC079587.1-201ENST00000603846 277 ntBASIC4.99□□□□□ -1.61
MSH4O15457 QTRT1P1-201ENST00000604344 1078 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC097505.1-201ENST00000610199 565 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AL121890.3-201ENST00000618494 516 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC011944.2-201ENST00000624440 683 ntBASIC4.99□□□□□ -1.61
MSH4O15457 PCAT14-202ENST00000627127 3935 ntBASIC4.99□□□□□ -1.61
MSH4O15457 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH4O15457 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
MSH4O15457 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 AP001002.1-201ENST00000625148 1513 ntBASIC4.98□□□□□ -1.61
MSH4O15457 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 MIR331-201ENST00000362302 94 ntBASIC4.98□□□□□ -1.61
MSH4O15457 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH4O15457 AL359643.1-201ENST00000404109 423 ntBASIC4.98□□□□□ -1.61
MSH4O15457 RPS20P14-201ENST00000412545 360 ntBASIC4.98□□□□□ -1.61
MSH4O15457 VN1R31P-201ENST00000417498 730 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH4O15457 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH4O15457 RPL34P6-201ENST00000432390 345 ntBASIC4.98□□□□□ -1.61
MSH4O15457 PPIAP13-201ENST00000434706 478 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AC073143.1-201ENST00000436316 395 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AC114495.1-201ENST00000441274 436 ntBASIC4.98□□□□□ -1.61
MSH4O15457 PHBP16-201ENST00000446318 950 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.98□□□□□ -1.61
MSH4O15457 OR11I1P-201ENST00000486033 954 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH4O15457 HPRT1P1-201ENST00000509498 657 ntBASIC4.98□□□□□ -1.61
MSH4O15457 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH4O15457 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH4O15457 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.98□□□□□ -1.61
MSH4O15457 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH4O15457 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.98□□□□□ -1.61
MSH4O15457 AL160290.3-201ENST00000604869 165 ntBASIC4.98□□□□□ -1.61
MSH4O15457 MIR6758-201ENST00000620653 63 ntBASIC4.98□□□□□ -1.61
MSH4O15457 MIR6810-201ENST00000622701 70 ntBASIC4.98□□□□□ -1.61
MSH4O15457 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
MSH4O15457 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MSH4O15457 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.98□□□□□ -1.61
MSH4O15457 AC126323.6-202ENST00000568092 3511 ntBASIC4.97□□□□□ -1.61
MSH4O15457 MAPK10-286ENST00000641208 8747 ntBASIC4.97□□□□□ -1.61
MSH4O15457 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MSH4O15457 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH4O15457 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 RN7SKP74-201ENST00000362849 309 ntBASIC4.97□□□□□ -1.61
MSH4O15457 AL445213.1-201ENST00000412589 747 ntBASIC4.97□□□□□ -1.61
MSH4O15457 RPL21P108-201ENST00000413857 481 ntBASIC4.97□□□□□ -1.61
MSH4O15457 P2RY10P2-201ENST00000416730 913 ntBASIC4.97□□□□□ -1.61
MSH4O15457 AC096644.3-201ENST00000416788 338 ntBASIC4.97□□□□□ -1.61
MSH4O15457 RPEP2-201ENST00000432149 701 ntBASIC4.97□□□□□ -1.61
MSH4O15457 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.97□□□□□ -1.61
MSH4O15457 AC011998.1-201ENST00000433403 117 ntBASIC4.97□□□□□ -1.61
MSH4O15457 RAB9AP5-201ENST00000437794 597 ntBASIC4.97□□□□□ -1.61
MSH4O15457 RAB9AP2-201ENST00000443911 597 ntBASIC4.97□□□□□ -1.61
MSH4O15457 RPL7P33-201ENST00000444159 742 ntBASIC4.97□□□□□ -1.61
MSH4O15457 DDX39BP2-208ENST00000453923 258 ntBASIC4.97□□□□□ -1.61
MSH4O15457 SEPT14P1-201ENST00000458703 648 ntBASIC4.97□□□□□ -1.61
MSH4O15457 ATP1B1P1-201ENST00000509767 915 ntBASIC4.97□□□□□ -1.61
MSH4O15457 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.97□□□□□ -1.61
MSH4O15457 TRAV8-5-201ENST00000537369 341 ntBASIC4.97□□□□□ -1.61
MSH4O15457 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.97□□□□□ -1.61
MSH4O15457 AC084033.1-201ENST00000550830 633 ntBASIC4.97□□□□□ -1.61
MSH4O15457 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.97□□□□□ -1.61
MSH4O15457 AC027455.1-201ENST00000574104 594 ntBASIC4.97□□□□□ -1.61
MSH4O15457 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH4O15457 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.97□□□□□ -1.61
MSH4O15457 AL445423.1-201ENST00000609941 536 ntBASIC4.97□□□□□ -1.61
MSH4O15457 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
MSH4O15457 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.97□□□□□ -1.61
MSH4O15457 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MSH4O15457 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
MSH4O15457 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.96□□□□□ -1.61
MSH4O15457 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
MSH4O15457 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms