Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 AL390862.1-201ENST00000635467 1469 ntBASIC5.45□□□□□ -1.54
TRIM38O00635 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM38O00635 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM38O00635 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 MTCO1P6-201ENST00000481192 1384 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC079097.1-201ENST00000512187 1399 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 DDX43P2-201ENST00000604753 1354 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 TCP11X1-202ENST00000622971 1372 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 BX005019.1-201ENST00000561881 1810 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 RPL23P2-201ENST00000320371 421 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC005294.1-201ENST00000355509 281 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 RNA5SP326-201ENST00000363209 110 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 U8.4-201ENST00000363626 134 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 RNU6-304P-201ENST00000364855 107 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 RNU6-549P-201ENST00000384433 107 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC005033.1-201ENST00000428904 813 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC096638.2-201ENST00000434965 711 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM38O00635 RPL12P3-201ENST00000440080 396 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 MTCO1P53-201ENST00000441633 699 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 AL592437.1-201ENST00000443781 492 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AL031313.1-201ENST00000448435 256 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 RPL6P9-201ENST00000466502 859 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 RPSAP50-201ENST00000481955 852 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 RPS23P1-201ENST00000491662 432 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM38O00635 MTCYBP35-201ENST00000503630 1137 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC119751.1-201ENST00000513357 765 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AP001207.2-201ENST00000519490 539 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC122688.1-201ENST00000541494 223 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 MRPS36P5-201ENST00000551909 298 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC068714.1-201ENST00000559623 800 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM38O00635 RPP40P2-201ENST00000603596 712 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC073387.2-201ENST00000604797 784 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC080013.3-201ENST00000606839 578 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC025574.2-201ENST00000615621 514 ntBASIC5.44□□□□□ -1.54
TRIM38O00635 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM38O00635 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM38O00635 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM38O00635 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM38O00635 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM38O00635 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 RNF6P1-201ENST00000444889 1784 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM38O00635 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 RN7SKP6-201ENST00000364795 319 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 RNU6-317P-201ENST00000384031 107 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 MIR585-201ENST00000384887 94 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 MIR765-201ENST00000390226 114 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 RN7SKP213-201ENST00000410746 298 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM38O00635 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 RNF10P1-201ENST00000418589 369 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM38O00635 MTCO2P23-201ENST00000425216 680 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 OR5AW1P-201ENST00000426334 1006 ntBASIC5.43□□□□□ -1.54
TRIM38O00635 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms