Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RN7SKP149-201ENST00000363008 344 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 MIR659-201ENST00000384963 97 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 YWHAZP2-201ENST00000440317 728 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 ABCF2P2-201ENST00000450549 296 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RPL7AP6-201ENST00000477943 801 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC004453.1-201ENST00000487895 408 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 NDUFA5P12-201ENST00000503796 343 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RNA5SP497-201ENST00000516081 97 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC008676.3-201ENST00000521237 435 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 EDDM3DP-201ENST00000554692 434 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 A2MP1-204ENST00000566278 4130 ntBASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM49D1C9J1S8 AC245100.2-201ENST00000454544 1679 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC007342.9-201ENST00000623877 1385 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 NPM1P26-201ENST00000426339 738 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AP001324.1-201ENST00000428553 399 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 RNU6-775P-201ENST00000459318 96 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC104849.1-201ENST00000462623 405 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC010469.1-201ENST00000463864 576 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 RPL5P30-201ENST00000465511 891 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 RN7SL329P-201ENST00000467740 299 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AL358913.1-201ENST00000554342 121 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC020634.1-201ENST00000608701 549 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 AC125257.1-201ENST00000560400 2930 ntBASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM49D1C9J1S8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM49D1C9J1S8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM49D1C9J1S8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM49D1C9J1S8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 RHOT1P2-201ENST00000366423 333 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 MIR93-201ENST00000385024 80 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 TMX2P1-201ENST00000436507 708 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 PA2G4P6-201ENST00000438325 1197 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 RN7SL610P-201ENST00000463845 291 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 MYL12AP1-201ENST00000518490 515 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 OR5M2P-201ENST00000529003 936 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC008638.3-201ENST00000603341 463 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 NF1P10-201ENST00000613227 742 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC068870.2-201ENST00000620635 389 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms