Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC034205.1-201ENST00000520621 638 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MIR4277-201ENST00000578298 84 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MIR4715-201ENST00000584117 79 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC091178.1-203ENST00000584586 279 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RPL7P50-201ENST00000600588 727 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC068790.7-201ENST00000602347 528 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL133338.2-201ENST00000604292 736 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AP005019.3-201ENST00000620418 560 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR14L1P-202ENST00000641545 3009 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MFSD8-216ENST00000641147 4009 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL132640.2-201ENST00000559968 1698 ntBASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TCRBV4S1A1TA0A5B7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNA5SP397-201ENST00000391323 118 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR2X1P-201ENST00000421144 687 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL645608.4-201ENST00000423619 154 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL18P10-201ENST00000425606 538 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC092017.2-201ENST00000427600 362 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL450263.2-201ENST00000439400 589 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CYCSP42-201ENST00000450823 238 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 Z95152.1-201ENST00000453556 656 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NIP7P2-201ENST00000485801 544 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AK4P6-201ENST00000505168 528 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC093840.1-201ENST00000511599 336 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC091979.2-201ENST00000607514 214 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MIR6758-201ENST00000620653 63 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL049536.1-201ENST00000625043 744 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 U3.53-201ENST00000628922 216 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC055839.1-201ENST00000634467 498 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MTCO1P15-201ENST00000529569 1526 ntBASIC3.65□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL592148.3-201ENST00000608771 2646 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL137100.1-201ENST00000556703 1620 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL139039.2-201ENST00000407436 479 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 P2RY10P2-201ENST00000416730 913 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 UQCRBP1-201ENST00000421129 336 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 EIF2S2P3-201ENST00000428356 999 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL21P91-201ENST00000429231 479 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC097523.2-201ENST00000435551 652 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CYCSP11-201ENST00000436426 315 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL10P17-201ENST00000453852 316 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC013356.1-201ENST00000489027 564 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC098799.3-201ENST00000506095 438 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNA5SP446-201ENST00000515955 82 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC008759.1-201ENST00000589783 983 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms