Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SNORA31.13-201ENST00000516624 135 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC084759.1-201ENST00000561168 290 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL109741.3-201ENST00000561748 592 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC106734.1-201ENST00000568646 663 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011447.4-201ENST00000587562 111 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MEMO1P5-201ENST00000604810 406 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL139407.1-201ENST00000613826 1175 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC018926.1-201ENST00000616335 435 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL353662.3-201ENST00000625131 237 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL049767.1-202ENST00000637826 242 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 THAP12P4-201ENST00000528321 2266 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC083843.2-201ENST00000568248 6253 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC139713.2-215ENST00000641428 5037 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MIR323A-201ENST00000362199 86 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU4-31P-201ENST00000384211 141 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SNORA70-201ENST00000384436 135 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OOSP1-201ENST00000398992 1270 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL021331.1-201ENST00000402817 582 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 U3.36-201ENST00000408418 213 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 GTF2IP5-201ENST00000414608 731 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BX664727.1-201ENST00000416024 466 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR6C64P-201ENST00000419708 825 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PNRC2P1-201ENST00000423940 420 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC022022.1-201ENST00000430304 178 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL035458.1-201ENST00000433096 585 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL589765.3-201ENST00000446084 462 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC104651.2-201ENST00000447549 528 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 HMGN1P5-201ENST00000448591 263 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPL7P55-201ENST00000450522 746 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL133244.1-201ENST00000456007 258 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC093890.1-201ENST00000502554 540 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SNRPCP2-201ENST00000504370 475 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC112518.2-201ENST00000508565 425 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MTCO3P27-201ENST00000514397 196 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RN7SKP141-201ENST00000516167 338 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC090888.3-201ENST00000558917 509 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC015912.2-201ENST00000571053 181 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC124283.4-201ENST00000581815 456 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BNIP3P39-201ENST00000601077 554 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL121932.1-201ENST00000605542 214 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC026741.1-201ENST00000605892 482 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL139022.2-201ENST00000606934 443 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL391834.1-201ENST00000609609 560 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011472.4-201ENST00000615848 491 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC008115.4-201ENST00000619780 775 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC022306.3-201ENST00000619930 550 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL359757.1-201ENST00000623176 255 ntBASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.38□□□□□ -1.71
TRBV4-1A0A0J9YWV2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms