Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 AC067852.7-201ENST00000623270 535 ntBASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 AC103706.2-201ENST00000638080 240 ntBASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 AC009313.2-201ENST00000417893 1941 ntBASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA3Q9Y5H0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC134882.1-201ENST00000603738 1676 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC133552.1-201ENST00000569988 4007 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 BCORP1-203ENST00000513194 5093 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SKP160-201ENST00000363804 340 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SNORD65.1-201ENST00000390889 71 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SNRPEP6-201ENST00000407465 277 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU4-72P-201ENST00000410754 173 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU2-6P-201ENST00000411404 190 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 NMD3P2-201ENST00000421815 761 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC234781.2-201ENST00000426370 994 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC007559.1-201ENST00000428736 355 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC126120.1-201ENST00000431082 470 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 ACTR3P2-201ENST00000439585 1257 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 CUBNP2-201ENST00000443534 1139 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RFC5P1-201ENST00000454419 874 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC015724.1-201ENST00000478577 156 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 CDC42P3-201ENST00000518493 633 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC008015.1-201ENST00000555505 465 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC051619.2-201ENST00000559063 397 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 MIR4489-201ENST00000578869 62 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 OR7E18P-201ENST00000592589 702 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC013244.1-201ENST00000604279 193 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC104695.2-201ENST00000605056 775 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 AC003992.1-201ENST00000635364 557 ntBASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA3Q9Y5H0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AL353743.4-201ENST00000422653 1547 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 OR10R3P-201ENST00000361688 942 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 SNORA64.1-201ENST00000362600 132 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 SNORD1C-201ENST00000363315 78 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RNU6-839P-201ENST00000363347 108 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 OR2AT2P-201ENST00000413438 905 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC009518.2-201ENST00000418056 731 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 UBE2V1P1-201ENST00000430836 445 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 ATP5F1P1-201ENST00000433775 569 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AL445928.1-201ENST00000435545 222 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 MTND3P1-201ENST00000441336 220 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RPL23AP76-201ENST00000441860 458 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RPS7P3-201ENST00000443360 580 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 OSTCP1-201ENST00000455507 450 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms