Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 ERCC6-202ENST00000374127 1782 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC129502.1-201ENST00000623261 1654 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 MAPK10-371ENST00000641952 5209 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 RNA5SP429-201ENST00000363688 109 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL359715.1-201ENST00000404330 555 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL390316.1-201ENST00000406279 553 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL807761.1-201ENST00000417622 171 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 SLC35E1P1-201ENST00000419313 864 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL590135.1-201ENST00000422215 156 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 BRWD1P3-201ENST00000428816 390 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 UOX-201ENST00000471089 899 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 RN7SL379P-201ENST00000479912 293 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC097473.1-201ENST00000508142 408 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 RN7SKP24-201ENST00000515888 284 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AP003385.6-201ENST00000531603 374 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL845552.1-201ENST00000556820 323 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 RN7SL32P-201ENST00000580514 281 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC011447.2-201ENST00000592921 283 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AL035410.2-201ENST00000604963 864 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 BCRP9-201ENST00000605312 388 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 MIR665-201ENST00000635949 72 ntBASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC9.14□□□□□ -0.95
TRIM35Q9UPQ4 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 ZNF652P1-201ENST00000442420 1309 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC010132.2-201ENST00000295493 1043 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 RN7SKP95-201ENST00000362860 303 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.389-201ENST00000383924 113 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 MIR187-201ENST00000385062 109 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AL590609.2-201ENST00000421430 368 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 CYP4F32P-201ENST00000426492 504 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC007365.2-201ENST00000428806 458 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 LSM1P1-201ENST00000438629 273 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AL645936.1-201ENST00000441979 518 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC011742.2-201ENST00000443818 352 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 DNAJC19P8-201ENST00000452887 259 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 TREML3P-201ENST00000457327 501 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 SNORD127-201ENST00000458892 86 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 RN7SL259P-201ENST00000478499 253 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AL163973.1-201ENST00000484753 577 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 MTND1P19-201ENST00000511780 315 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 Y_RNA.661-201ENST00000516003 99 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 OR8R1P-201ENST00000543943 764 ntBASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC9.13□□□□□ -0.95
TRIM35Q9UPQ4 TRAV15-201ENST00000556680 249 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms