Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC105233.1-201ENST00000498840 781 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 RN7SKP34-201ENST00000516142 244 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC008694.2-201ENST00000517591 306 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AP000827.1-201ENST00000527814 258 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC107918.3-201ENST00000533272 382 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 MIR4270-201ENST00000581799 70 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AL133406.3-201ENST00000606817 541 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AL133243.1-201ENST00000614487 366 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC055839.1-201ENST00000634467 498 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 OR2L1P-202ENST00000641567 1023 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC027290.2-201ENST00000623210 18662 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 MFSD8-242ENST00000641690 4199 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 RLIMP2-201ENST00000427891 1563 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 MIR659-201ENST00000384963 97 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 SNORA68.2-201ENST00000391263 128 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 RN7SKP216-201ENST00000411050 312 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 USP9YP9-201ENST00000429406 715 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 CEACAMP6-201ENST00000452007 574 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 RN7SL826P-201ENST00000479724 288 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 RNA5SP360-201ENST00000516555 118 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AP001781.1-201ENST00000530977 207 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 DUX4L52-201ENST00000549363 777 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 RPL23AP97-201ENST00000568955 471 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 Z98200.1-201ENST00000607298 470 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AL158062.1-201ENST00000619632 745 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AC091953.3-201ENST00000623220 236 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AC006065.6-201ENST00000625201 545 ntBASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS29Q9UBQ0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 RN7SKP224-201ENST00000364140 325 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 RNA5SP146-201ENST00000410743 123 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC073335.1-201ENST00000427776 363 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 SKP1P3-201ENST00000429280 487 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC008410.1-201ENST00000483777 339 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 CD24P2-201ENST00000565486 219 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC069061.3-201ENST00000582254 823 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 MIR4480-201ENST00000582492 71 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC233280.2-201ENST00000603917 1070 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC020634.1-201ENST00000608701 549 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AL049539.1-201ENST00000611964 459 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC023509.5-201ENST00000617434 807 ntBASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS29Q9UBQ0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms