Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC010374.1-201ENST00000503762 1237 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AP000648.2-201ENST00000624182 404 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AL034408.1-202ENST00000636088 415 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 TTC3P1-201ENST00000399586 6081 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 RN7SKP182-201ENST00000410772 298 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC062016.2-201ENST00000420950 676 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC090686.1-201ENST00000481577 749 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 RN7SKP83-201ENST00000516512 178 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 SNORA70.24-201ENST00000517233 118 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 YPEL5P3-201ENST00000547227 352 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 OR52E6-202ENST00000379946 954 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 TMX2P1-201ENST00000436507 708 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC115115.1-201ENST00000449927 248 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 GAPDHP36-201ENST00000480688 918 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC004938.1-201ENST00000438468 308 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC110792.1-201ENST00000491826 472 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AC110743.1-201ENST00000584870 478 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
CHD7Q9P2D1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD7Q9P2D1 AL139247.1-201ENST00000422768 325 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 RPL21P91-201ENST00000429231 479 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 MIR5195-201ENST00000583555 115 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC005034.4-201ENST00000603612 899 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 MIR6868-201ENST00000611215 58 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC007546.2-201ENST00000623996 360 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC140134.1-201ENST00000511830 3544 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC021242.1-201ENST00000507315 2035 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms