Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RPL6P5-201ENST00000445678 828 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC010374.1-201ENST00000503762 1237 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC099522.1-202ENST00000514718 367 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 RNA5SP73-201ENST00000516744 108 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 RPL23AP97-201ENST00000568955 471 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 Y_RNA.333-201ENST00000365274 102 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC069304.1-201ENST00000491593 704 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 GTF2IP22-201ENST00000554443 182 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AC087499.8-201ENST00000578406 226 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 DNM1P47-203ENST00000571780 12667 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 TCP11X1-202ENST00000622971 1372 ntBASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 RPL6P29-201ENST00000414863 865 ntBASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AC004938.1-201ENST00000438468 308 ntBASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AL359219.2-201ENST00000555184 348 ntBASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.84□□□□□ -1.47
PHRF1Q9P1Y6 RLIMP1-201ENST00000339626 1680 ntBASIC5.84□□□□□ -1.48
PHRF1Q9P1Y6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 SNORA63.1-201ENST00000362493 131 ntBASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 RPL37P1-201ENST00000432310 284 ntBASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PHRF1Q9P1Y6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 BCORP1-203ENST00000513194 5093 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RN7SKP167-201ENST00000411047 285 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 ARAFP1-201ENST00000422172 605 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RPL7P2-201ENST00000427639 268 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 HMGB3P5-201ENST00000428894 612 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 CDY14P-201ENST00000431260 1014 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 CDY12P-201ENST00000440679 1015 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 CDY13P-201ENST00000445813 1015 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 CDY23P-201ENST00000451661 1014 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RN7SL812P-201ENST00000493791 279 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 AC104164.2-201ENST00000496953 495 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 DYNLL1P4-201ENST00000549314 266 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms