Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.65□□□□□ -1.66
CISHQ9NSE2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CISHQ9NSE2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CISHQ9NSE2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CISHQ9NSE2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 RPL12P34-201ENST00000424532 479 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 FHP1-201ENST00000442741 703 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC005008.1-201ENST00000456151 612 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC006463.2-201ENST00000473326 348 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AL352979.3-201ENST00000553515 247 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC006363.1-201ENST00000603806 463 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AL034374.2-201ENST00000605281 548 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC091979.2-201ENST00000607514 214 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AL138721.1-201ENST00000616756 179 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 MIR7641-1-201ENST00000627518 61 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 MTCO1P15-201ENST00000529569 1526 ntBASIC4.65□□□□□ -1.67
CISHQ9NSE2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.65□□□□□ -1.67
CISHQ9NSE2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CISHQ9NSE2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 EIF2AP4-201ENST00000424793 1781 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC010132.2-201ENST00000295493 1043 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 RNA5SP175-201ENST00000364275 119 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AL583835.1-201ENST00000399570 407 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 RPS29P17-201ENST00000430795 166 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 RPL23AP52-201ENST00000439311 478 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 TPT1P13-201ENST00000449760 499 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 RPL7P32-201ENST00000457119 744 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 RPL7P22-201ENST00000466005 733 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC011276.1-201ENST00000469688 323 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC135999.1-201ENST00000478962 479 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC091544.1-201ENST00000484702 348 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC021146.3-201ENST00000511911 260 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC100770.1-201ENST00000532310 322 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 RPL26P30-202ENST00000602923 645 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AL354984.3-201ENST00000604803 325 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC025175.1-201ENST00000606482 759 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC007546.1-201ENST00000619452 559 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC020763.5-201ENST00000623298 430 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 AC140479.6-201ENST00000633535 357 ntBASIC4.64□□□□□ -1.67
CISHQ9NSE2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.64□□□□□ -1.67
CISHQ9NSE2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CISHQ9NSE2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 IL6STP1-201ENST00000346911 1020 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 RNU6-249P-201ENST00000363016 102 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms