Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RPS23P10-201ENST00000416185 486 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 BMS1P13-201ENST00000417301 885 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 RHOT1P3-201ENST00000436571 331 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC000111.2-201ENST00000448200 210 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 PPIAP20-201ENST00000449839 135 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC116562.1-201ENST00000485355 781 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 SCARNA21.2-201ENST00000516600 166 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC008126.1-201ENST00000549019 480 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AL360157.1-201ENST00000565962 87 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC006116.3-201ENST00000592968 361 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC093799.2-201ENST00000610062 578 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC091905.2-201ENST00000623143 306 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 LINC01739-205ENST00000641890 573 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AL627171.1-201ENST00000618845 1308 ntBASIC4.13□□□□□ -1.75
HMG20AQ9NP66 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMG20AQ9NP66 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AL590763.1-201ENST00000398297 1545 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SNORA11.3-201ENST00000408471 128 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 MTND4LP12-201ENST00000448237 295 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC104849.1-201ENST00000462623 405 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC004980.4-201ENST00000513375 203 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SNORD116-30-201ENST00000516468 85 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 MEMO1P5-201ENST00000604810 406 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 HMGB1P50-201ENST00000605814 607 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SNORA35B-201ENST00000607417 129 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SNORA11.6-201ENST00000619030 128 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 BMS1P21-201ENST00000634565 365 ntBASIC4.12□□□□□ -1.75
HMG20AQ9NP66 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMG20AQ9NP66 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RNA5SP388-201ENST00000362584 119 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RNA5SP151-201ENST00000365632 117 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AL589647.1-201ENST00000402485 466 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AP002530.1-201ENST00000405705 684 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AL603766.1-201ENST00000407763 664 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RNA5SP306-201ENST00000411087 107 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 RN7SKP273-201ENST00000411392 314 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AL590609.2-201ENST00000421430 368 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AL355433.1-201ENST00000422804 300 ntBASIC4.11□□□□□ -1.75
HMG20AQ9NP66 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.11□□□□□ -1.75
HMG20AQ9NP66 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms