Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL031119.1-201ENST00000404707 1879 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC017104.4-201ENST00000636283 1592 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MTND4P11-201ENST00000417020 1058 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC004690.1-201ENST00000418216 328 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MTCO1P52-201ENST00000433928 531 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MRPS33P4-201ENST00000434892 317 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL162388.1-201ENST00000450912 352 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC084754.1-201ENST00000463466 464 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 NDUFA5P5-201ENST00000468361 342 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 RPS26P28-201ENST00000470806 348 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC090543.1-201ENST00000492168 485 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 RN7SL466P-201ENST00000497546 295 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 HMGB1P3-201ENST00000502802 616 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 NDUFB4P12-201ENST00000513465 390 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC022784.5-201ENST00000522241 437 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 NMNAT1P1-201ENST00000554095 876 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC021483.2-201ENST00000567415 758 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC134669.1-201ENST00000581275 672 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC005520.3-201ENST00000602874 370 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC105254.2-201ENST00000603636 436 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL133406.3-201ENST00000606817 541 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL096803.3-201ENST00000609032 532 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC074276.2-201ENST00000619891 348 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL669942.2-201ENST00000620352 697 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AP003072.4-201ENST00000624580 310 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC011493.1-201ENST00000596753 1632 ntBASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.18□□□□□ -1.9
SND1-IT1Q9HBX3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC008758.3-201ENST00000507003 1829 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC015813.6-201ENST00000624409 5808 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RN7SKP126-201ENST00000411143 300 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 VN1R37P-201ENST00000419096 748 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms