Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPSAP50-201ENST00000481955 852 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RPS4XP1-201ENST00000482189 787 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL049874.2-201ENST00000492636 288 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 UBTFL10-201ENST00000528532 562 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 OR8I1P-201ENST00000529291 931 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC005412.1-201ENST00000580812 1049 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 MIR4472-2-201ENST00000582069 67 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC113368.1-201ENST00000603736 382 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 Z82195.1-201ENST00000604558 398 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC024060.1-201ENST00000607052 494 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 MIR6798-201ENST00000612887 67 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 ZNF849P-201ENST00000594711 1566 ntBASIC5.4□□□□□ -1.55
USP29Q9HBJ7 CASC19-281ENST00000642118 1554 ntBASIC5.4□□□□□ -1.55
USP29Q9HBJ7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 MTND4P8-201ENST00000514997 1362 ntBASIC5.4□□□□□ -1.55
USP29Q9HBJ7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.4□□□□□ -1.55
USP29Q9HBJ7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 SNORA67-201ENST00000384423 137 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 MT-TP-201ENST00000387461 68 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-1320P-201ENST00000390838 107 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNA5SP339-201ENST00000390987 122 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-1269P-201ENST00000391139 107 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 EI24P3-201ENST00000399046 1062 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 HSPA8P15-201ENST00000401676 786 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RPL35AP24-201ENST00000413846 330 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC107081.1-201ENST00000414975 361 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC108075.1-201ENST00000424692 529 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 FAM96AP1-201ENST00000430879 482 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC093716.1-201ENST00000435923 377 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC004022.1-201ENST00000447766 1066 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 BX842559.2-201ENST00000451418 605 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC092155.2-201ENST00000454675 477 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-599P-201ENST00000459383 107 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-1193P-201ENST00000459461 107 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RPL6P9-201ENST00000466502 859 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RPL7AP6-201ENST00000477943 801 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC093270.2-201ENST00000486157 792 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 NDUFA5P12-201ENST00000503796 343 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 MYL12BP2-201ENST00000503948 512 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC108120.2-201ENST00000512973 294 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC006427.1-201ENST00000514359 712 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RN7SKP141-201ENST00000516167 338 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-1028P-201ENST00000517164 93 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 HMGB1P40-201ENST00000525121 540 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 OR8A2P-201ENST00000528631 952 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 MRPS36P5-201ENST00000551909 298 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC012557.1-201ENST00000607115 611 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC116651.1-201ENST00000609724 556 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC009163.6-201ENST00000612367 342 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 RNU6-368P-201ENST00000620928 107 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms